Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02021 ATGCAGGAGACAACGACACATCCGTTAAAGCAGGTTAAGTTGGGGTTTATCAGTGGTCTTGTTCCTAGAGAAAAAGCAATTCCTTTTGAAAGAATTTTATTTCATGCTACTCGAGGAAATGTATTTCTGAAGCAGGTTGTGGTTGCACATCCTGCTCTTGATCCTTTATTAGGAGAGAAGGTCACTAGTTCTAAAATAGTAAAATCTTAA 210 0.3762 MQETTTHPLKQVKLGFISGLVPREKAIPFERILFHATRGNVFLKQVVVAHPALDPLLGEKVTSSKIVKS. 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02021 69 Pfam V-type ATPase 116kDa subunit family 9 64 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02021 Seca-Chr4 34505478 34505687 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02021 2 67 Primary Pumps ATPases(2) AT4G39080 54.545 3.84e-20 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02021 K02154 - jre:109008274 93.5893