Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02012 ATGAAAGGAAACAAGCCCTATCTGGTTGTGATTGTGATACAAGCCATATACGCTGTTATGTTTCTTCTCTCAAAAGCTGCATTCGACCATGGAATGAACAATTACATCTTCATCTTCTACAGACAAGCAGTAGCAACCCTTTTCCTCATCCCTTTTGCTTTCTTCTTCGAATGGATTACTTTAAGCTTGGACATATATGGGATTGGTCTTATTTACACCTCTGCAACTCTGGCTGCTGCTGTCACAAACTGTCTTCCAGTTATCACTTTCTTCTTGGCGCTCCTACTCAGGATTGAGAGTTTGAACATAAAGACGAAAGCTGGGATTGCCAAGTTGGTAGGAATTGTAGCATGCTTGGCTGGTGCATCAATTCTTGCCTTTTATAAAGGTACTCATTTTAAAATCTTAAGTCATCATCACCTAATGGGATACCATCCATGCCAACAACATCAAGCCCATGCTTCATCTAGTAAATGGATAAAGGGTTGCTTCCTCCTGCTCCTATCCAACACATTTTGGGGGCTATGGTTGGCATTTGTTATAAAAAGCTATCCTTCGAAATTGATGTTCACAACTCTTCAATGTTTCTTAAGCTCAATTCAGTCTTTCGTCATTGCCTTCGCCATAAAAAGGGACATTGAACAATGGAAGTTGGGTTGGAATGTCAGGCTCCTCGCTGTAGTATATTGTGGAATTATGGTCACGGGTGTCACGTATTACTTACAGACATGGGTTGTAGAGAAGAAAGGACCTGTGTTTCTAGCCATGTCAACGCCACTAGCTCTTATTATTACAATCTTCTCCTCTTCAATTGTCTTGGGCGAGATAATAAGTTTGGGGAGACTATACAGCGTATTATGGGGGAAAAGCAAGGAGCAAATGCCAAAAGCCTCACTAGACTTGGAGCAGACATCCGAAATGAAAGGAAAGAAGGCGTATGTGGTTGTGATTGTGATACAAGCCATATACGCCGGTAATTTTCTTCTCTCAAAAGCTGCATTCGACCATGGATTCAACAATTTCATCTTCATCTTCTACAGACAAGCACTAGCAACCCTTTTTCTTACCCCTTTCGCTTTCTTCTTCCAATGGAGACTTGCACCACCTTTGAGTTTCAAGACATTCTGCAACATTTTCTTCCTTTCTTTCTGCGGGATAACTTTAAGCTTGGAAATATATGGTGTTGGTCTTACTTACACCTCTGCAACTATGGCTGCTGCTGTCACAAACTGTCTTCCAGCTATCACCTTCTTCTTGGCGCTCCTACTCAGACATGAGAGTTTGAAAATAAAGACAGCAGCTGGGATTGCTAAGTTGGTAGGAGTTTTGGCATGCTTGGCTGGTGCAGCAACCCTTGCCTTTTATAAAGGTCCTCATTTTAAGATTTCAAGTCATCATCATCTTTTGGGATACCATAGCCAGCAACATCAAGGTCATGTCCCATCTGGTACATGGATAAAGGGTTGCTTCCTCCTGCTCCTCTCCCACTCATTATGGGGGCTGTGGCTGGTGCTACAGTAA 1521 0.4234 MKGNKPYLVVIVIQAIYAVMFLLSKAAFDHGMNNYIFIFYRQAVATLFLIPFAFFFEWITLSLDIYGIGLIYTSATLAAAVTNCLPVITFFLALLLRIESLNIKTKAGIAKLVGIVACLAGASILAFYKGTHFKILSHHHLMGYHPCQQHQAHASSSKWIKGCFLLLLSNTFWGLWLAFVIKSYPSKLMFTTLQCFLSSIQSFVIAFAIKRDIEQWKLGWNVRLLAVVYCGIMVTGVTYYLQTWVVEKKGPVFLAMSTPLALIITIFSSSIVLGEIISLGRLYSVLWGKSKEQMPKASLDLEQTSEMKGKKAYVVVIVIQAIYAGNFLLSKAAFDHGFNNFIFIFYRQALATLFLTPFAFFFQWRLAPPLSFKTFCNIFFLSFCGITLSLEIYGVGLTYTSATMAAAVTNCLPAITFFLALLLRHESLKIKTAAGIAKLVGVLACLAGAATLAFYKGPHFKISSHHHLLGYHSQQHQGHVPSGTWIKGCFLLLLSHSLWGLWLVLQ. 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02012 506 Pfam EamA-like transporter family 311 437 IPR000620 GO:0016020
Seca4g02012 506 Pfam EamA-like transporter family 161 283 IPR000620 GO:0016020
Seca4g02012 506 SUPERFAMILY Multidrug resistance efflux transporter EmrE 346 440 - -
Seca4g02012 506 PANTHER WAT1-RELATED PROTEIN 5 298 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02012 Seca-Chr4 34343272 34355351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02012 306 506 Nodulin-like Gene Family AT5G64700 55.288 7.76e-63 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g02012 - - gmx:100804562 489.189