Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01974 ATGCAACAAATAGGAAAAGGTGTAAGCCACGTTGGTGGTGACGCGTTAAAGCATGTTCCACATGGGGATGCTATCTTCATGAAGCAGTGGGTATGTGTAACATGGACCGACGAGGAATGCAAGCAGGCTTTGCAGAATTGTTATAAGGCACTTCCGGTGGATGGAAAATTGATTGTTTGCGAGCCGGTGCTGCCGGAGGTAACTGATGAGAGTCAAAGAACAAGGGCATTGCTTGGGGGTGACATATACATAATGACAATGTATAGATCTAAGGGAAAGCACAGGACTGAACAAGAGTTCAAACAACTCGGCATTTCTGCTGGTTTTCCTCATATCCGTGCCTTCTATATTGATTCTTTTTTCGCTATACTTGAGTTTCGGAAATGA 387 0.4419 MQQIGKGVSHVGGDALKHVPHGDAIFMKQWVCVTWTDEECKQALQNCYKALPVDGKLIVCEPVLPEVTDESQRTRALLGGDIYIMTMYRSKGKHRTEQEFKQLGISAGFPHIRAFYIDSFFAILEFRK. 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01974 128 Gene3D Vaccinia Virus protein VP39 6 114 IPR029063 -
Seca4g01974 128 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 128 IPR016461 GO:0008168
Seca4g01974 128 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 6 126 IPR029063 -
Seca4g01974 128 PANTHER O-METHYLTRANSFERASE 8 115 IPR016461 GO:0008168
Seca4g01974 128 Pfam O-methyltransferase domain 5 109 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01974 Seca-Chr4 33278567 33281406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01974 7 128 Monolignol Biosynthesis Gene Families AT3G53140 71.311 1.90e-62 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01974 - - aprc:113853000 197.978