Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01951 ATGAATCTCAATCTCCCTTCTCTGTCTCTCACGCGCTTCCCTGAGCGTCTTGTTGCTCCTCTTTGTTCTTCAGTTCCTACAACCGCTACTAGGGGCAATAGCGTGGAGAGTATTGCAATTGAAGGCCGTAATCTGAATTTCTCATTCAAGGCGAGGCAAACAAAGGACGTGCAAGTTCTTAGGGATTGTTCACTTCGCATTCCTTCTGGGCAGTTTTGGATGCTTCTTGGACCCAATGGGTGTGGAAAATCAACCCTCTTGAAGATTTTGGCTGGTCTCTTGACTCCAACTTCTGGAACAGTGTACGTGAATGAGCCTAAAAGTTTTGTTTTCCAAAATCCAGATCATCAGGTGGTGATGCCTACAGTAGATGCTGATGTTGCATTTGGTCTTGGTAAAATCAATTTAACCCAGGATGAAGTCAGATCTAGGGTGTCTCAAGCTCTGCATGCTGTTGGCCTGTCTGACTACATGAAGGTATTATGGACTACAACCTTGAACACTGAAATAAATGTGTGA 519 0.4451 MNLNLPSLSLTRFPERLVAPLCSSVPTTATRGNSVESIAIEGRNLNFSFKARQTKDVQVLRDCSLRIPSGQFWMLLGPNGCGKSTLLKILAGLLTPTSGTVYVNEPKSFVFQNPDHQVVMPTVDADVAFGLGKINLTQDEVRSRVSQALHAVGLSDYMKVLWTTTLNTEINV. 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01951 172 CDD ABC_cobalt_CbiO_domain1 41 159 IPR015856 GO:0005524|GO:0016020|GO:0055085
Seca4g01951 172 Gene3D - 35 167 IPR027417 -
Seca4g01951 172 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 40 159 - -
Seca4g01951 172 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 161 IPR027417 -
Seca4g01951 172 Pfam ABC transporter 60 156 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01951 Seca-Chr4 32753886 32757311 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01951 40 104 Calmodulin-binding Proteins AT2G36910 36.923 9.69e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01951 - - gmx:100813654 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01951 4 32753886 32757311 Seca4g01951 4 32753886 32757311 ECH