Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01943 ATGGGAGATCATCATGAAAACTCAACAGATGACTATATAGTCTGTTATGCACCAACCATGATAACAACAAATGGGATATGGCAAGGAGATAACCCTTTGGATTATTCTCTTCCTCTTTTCATCTTGCAATTAACTTTAGTTGTGGCTGCCACCCGCATATTCGTCTTCATTCTCAAGCCCTTTCGTCAGCCACGTGTAATTTCTGAAATCCTGGGTGGAGTAATGTTGGGTCCTTCAGTGCTTGGTCAAAATGAAAAATTTGCTACTGCAATTTTTCCTCTAAGAAGTGTGATGGTGATTGAAACAATGGCAAATGTTGGTCTCCTTTATTTTCTCTTCTTGGTTGGGGTGGAGATGGATATAACAGTGCTGAGAACTGCAGGTAAAAAAGCAGTGGCTGCTGCAATTGCTGGCATGGTCTTGCCTTTCATTATTGGAACTGCCTTCTCATTCCTTTTGAGAAAAGAATATGACACTGGAATGAACCAAGGCACTTACATTCTCTTCCTTGGTGTTGCTCTCTCTGTCACTGCTTTTCCTGTTCTAGCTAGAATCCTTGCAGAGCTCAAACTTGTCAACACAGAATTGGGAAGGCTTGCTCTTTCATCTGCACTCATTAATGATGTGTGTGCTTGGATTCTCTTAGCTTTAGCCATTGCTTTGTCTGAGAATGAATCAACTTCTTTTGCATCCTTGTGGGTTATATTGTCAGGTGTAGCATTTGTGGTCTTTTGTGTTTATGCTGTTAGACCAGCAGCTTCATGGGTAGTTAACAAAACCCCTGAAGGAGAATCATTCAGTGAGTTCTATATATCTCTTATATTAGCAGGGGTCATGATTTCAGGTTTCATCACTGATGCTATTGGAACTCATTCTGTTTTTGGAGCTTTTGTATTTGGTTTGGCAATCCCAAGTGGACCACTTGGTATTACTCTTGTGGAAAAGCTTGAAGACTTTGTTTCTGGACTTCTACTCCCTCTCTTTTTTGCCATTAGTGGGTTAAAAACCAATTTTGGACTCATCCATGGGTCCTACACTTGGGCAATTCTTATTCTAGTCATTTTTTTGGCTTGTATTGGCAAAATTGTTGGAACTCTAGCTGTTGCATTATTTTATCAAATGCCATTACATGAAGGAGCTACACTTGGTTTACTCATGAACACAAAAGGCCTTGTTGAGATGATTGTGCTTAATGTTGGAAAGGACCAAAAGGTTTTTGATGATGAATCATTTGCAATCATGGTGGTTATAACTGTGATCATGACTGCAATTATTGTACCTGCTATATCAATCATTTATAGACCATCAAGGAGAAGCATATATTACAAAAGAAGAACCATTCAGATATCAAAACCAGATGCAGAGTTCAGAGTCCTAGTATGTGTCCACAGTCCTAGAAATGTGCCAACAATGATCAACCTCCTTGAAGCCTCTAATCCAACAAAGAAGTCCCCAATATGTGTCTATGTGCTCCATTTGGTTGAACTTAGTGGCCGTACATCTGCTATGCTCATTGTTCACAACACAGCAAAACCTGATCACACTGCCCTTAACAGAACTGAAGCTCAATCTGATCACATAATCAGTGCCTTTCAAAACTATGAACAACATGCTTCTTTTGTTTCAGTCCAACCTCTAACAGCAATCTCCCCTTATTCCACCATGCATGAAGATATATGTAATTTAGCAGAAGAAAAACGTGTTTCCTTAATAATAGTTCCTTTTCATAAACAACAAACAGTTGATGGTGAGATGGAAGCAACAAACATGGCATTTAGAGGTGTCAACCAGAATGTACTAGCAAATGCACCTTGCTCAGTGGGAATTCTAGTAGATAGAGGGTTAAGTGTTTCTAGCCGCATGGCTTCAAATCAAGCATCTCATCATGTAGCTATATTGTTCTTTGGAGGACCAGATGATAGAGAAGCATTATGTTATGGATGGAGAATGTTGGAACATTCAGGGATAAACCTTACTGTAATGCGTTTTGTTCCTGGGGAACAAGTATGTGAGCCAGTGAAGCAACATGACATGAATTCAGATGAACCAACTGTGTTAACAGTGCAAACAGAGAAGGATTTACAAAGACAACTTGATGAAAAGCTTATACATGAGTTTAGAATAAGAAATGGTGATGATGATTCAGTTGATTATGTTGAGAAGATAGTTAGCAATGGAGAGGAAACAGTGGCAGCAATAAGGACAATGGATGATATTCATGACCTTTTTATTGTTGGGAGAGGTCAAGGAACGATATCACCACTTACAGCAGGACTCACTGATTGGAGTGAGTGTCCTGAGATAGGAGCAATTGGGGATTTGTTAGCATCTTCAGATTTTGCAGCAACAGCTTCTGTGTTGGTAGTGCAACAATATGTTGGGTTAGAGTCATATAGTGAGGGGATGGAAACACCAGATGGTGAAGAATATATAATCACTGAAATTAACCAACATTCTTCTACACCACCAAGAGGACATGTTGCTTTCAATACAGAACGTGTTTGA 2505 0.3948 MGDHHENSTDDYIVCYAPTMITTNGIWQGDNPLDYSLPLFILQLTLVVAATRIFVFILKPFRQPRVISEILGGVMLGPSVLGQNEKFATAIFPLRSVMVIETMANVGLLYFLFLVGVEMDITVLRTAGKKAVAAAIAGMVLPFIIGTAFSFLLRKEYDTGMNQGTYILFLGVALSVTAFPVLARILAELKLVNTELGRLALSSALINDVCAWILLALAIALSENESTSFASLWVILSGVAFVVFCVYAVRPAASWVVNKTPEGESFSEFYISLILAGVMISGFITDAIGTHSVFGAFVFGLAIPSGPLGITLVEKLEDFVSGLLLPLFFAISGLKTNFGLIHGSYTWAILILVIFLACIGKIVGTLAVALFYQMPLHEGATLGLLMNTKGLVEMIVLNVGKDQKVFDDESFAIMVVITVIMTAIIVPAISIIYRPSRRSIYYKRRTIQISKPDAEFRVLVCVHSPRNVPTMINLLEASNPTKKSPICVYVLHLVELSGRTSAMLIVHNTAKPDHTALNRTEAQSDHIISAFQNYEQHASFVSVQPLTAISPYSTMHEDICNLAEEKRVSLIIVPFHKQQTVDGEMEATNMAFRGVNQNVLANAPCSVGILVDRGLSVSSRMASNQASHHVAILFFGGPDDREALCYGWRMLEHSGINLTVMRFVPGEQVCEPVKQHDMNSDEPTVLTVQTEKDLQRQLDEKLIHEFRIRNGDDDSVDYVEKIVSNGEETVAAIRTMDDIHDLFIVGRGQGTISPLTAGLTDWSECPEIGAIGDLLASSDFAATASVLVVQQYVGLESYSEGMETPDGEEYIITEINQHSSTPPRGHVAFNTERV. 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01943 834 Gene3D - 476 760 - -
Seca4g01943 834 PANTHER CATION/H + ANTIPORTER 14 793 - -
Seca4g01943 834 Gene3D - 39 440 IPR038770 -
Seca4g01943 834 FunFam Cation/H(+) antiporter 15 39 440 - -
Seca4g01943 834 Pfam Sodium/hydrogen exchanger family 47 427 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01943 Seca-Chr4 32622228 32625649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01943 1 806 Antiporter Super Family AT2G13620 70.471 0.0 1142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01943 K26731 - gmx:100818927 1321.61