Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01932 ATGATCACTTCCAGATACCCTCATATCGAAGGTATCAATTTTGACTTGCCTCATGTCATACAACATGACCCTTCCTATCTTGGTATGACCTTTACTTACTTGTTCTAA 108 0.3796 MITSRYPHIEGINFDLPHVIQHDPSYLGMTFTYLF. 36
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01932 35 Pfam O-methyltransferase domain 2 28 IPR001077 GO:0008171
Seca4g01932 35 Gene3D Vaccinia Virus protein VP39 1 30 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01932 Seca-Chr4 32376437 32376544 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01932 1 29 Monolignol Biosynthesis Gene Families AT5G54160 62.069 4.41e-09 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01932 K13066 - cic:CICLE_v100108601m 56.6102