Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01928 ATGCGTTTAAATGTTGAGGAGTATAAAAAGTACCACTTAATTAGTCAGCTTGTGGCCTTTGAATTCTATAATACGTATGCATGTAAAAGGAGATTCGCCAGTCGTAGATGGAATGTGTTGAAAAACAAAAGAGGGGAAGTAACACAGCAAGAATTTGTTTGTTTCAAGGAGAGATTTCGTGACAAGAAACACTTAGAGAGGAAAGGAAGAAAGAGAGAACCTAGAGCAATGACAAGGTGTGGTTGTACTACTAGTTGTTGTGTGCGTCTTGATCGAGAAAGTGGTCGATGGTGGGTGAAAGCTTTTAATGATTCTCATAGTCATGAGCTGTTAGGGGAGGAGTATGTAGAAATGCTGCCTGCACATAGAAAGATGGGTGATGCTGACTTAATGCATTTGAATAGTATGAGAGAAGCTGGTATTGGTGTAACATAG 435 0.3954 MRLNVEEYKKYHLISQLVAFEFYNTYACKRRFASRRWNVLKNKRGEVTQQEFVCFKERFRDKKHLERKGRKREPRAMTRCGCTTSCCVRLDRESGRWWVKAFNDSHSHELLGEEYVEMLPAHRKMGDADLMHLNSMREAGIGVT. 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01928 144 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 18 138 - -
Seca4g01928 144 Pfam FAR1 DNA-binding domain 21 111 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01928 Seca-Chr4 32301634 32302068 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g01928 FAR1 7.5e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01928 - - mtr:112417197 145.206