Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01877 ATGGCAGAAGGGGAAGAAAGAAATGTGAGTGGCTTTAATGATGGTACTGGATATGGCAGCTCCTTTATCCGAGCTAACAATCAGAATTATCACAATATGTTTCCAGATGAAGTACAAATTAGAACCAGCAGTGGTTTCCGGAGTATAAATCCTGAAAATTCAAGAGCAATGCAAAAGTTGTTCGTTGAAGAAGTGCTTGCCATGCAATTTGATTCCTGTGAAGCTGGGGAGTCATTTTACCGTAAATATGCTTCAGCTGTTGGCTTTAATTTTCAAGAGGATGACATGGGTAAAAAAAAGCTGGGTGGTGAGGTTGTCATGAAAAGATGGGTTTGTAATGGACAATGTTTTCAGCAAAATCTAGGGGATCCTGGATCATCTACTAGAGTTAATTGTTCTGCTGCATTTTGCATATATGTTCACCGTGTCAGACATAAGTGGCTTCGTTCCTTGCCTCCAGTATCTAGCGATCTTATGGAAAAACTGTTGCGCTATGGTGCTTTGACGTCTAATTTTTCCATACTAAGTTACTTGGCGTCAAAATCTTCTGAGCAGACATATAACTCTGTGTGCAGTTCACTGTGTGAGTTAAGAAATGAACTAAAGGAGTGCTCTATTGCCTGTAGTGAGAGAGATGGCGGTTCTGTTTCAAGAATTGCGAGATCTAAAGGTAACCAGAAATGTGGAAGAAAGAAAACCAATGGAGACAAGCGAAGGAAAACCAATGGAGATGGGCATTCTAGAAATGTGTAA 753 0.4024 MAEGEERNVSGFNDGTGYGSSFIRANNQNYHNMFPDEVQIRTSSGFRSINPENSRAMQKLFVEEVLAMQFDSCEAGESFYRKYASAVGFNFQEDDMGKKKLGGEVVMKRWVCNGQCFQQNLGDPGSSTRVNCSAAFCIYVHRVRHKWLRSLPPVSSDLMEKLLRYGALTSNFSILSYLASKSSEQTYNSVCSSLCELRNELKECSIACSERDGGSVSRIARSKGNQKCGRKKTNGDKRRKTNGDGHSRNV. 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01877 250 MobiDBLite consensus disorder prediction 219 250 - -
Seca4g01877 250 Pfam FAR1 DNA-binding domain 78 147 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01877 Seca-Chr4 31511053 31516179 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g01877 FAR1 2.4e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01877 - - aip:107611742 81.2629