Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01871 ATGAAGGTGAAGAAGGGATGGCTTGCTGTTCAAGTGGGTTTAGAAGACCAAGAAGAAGATGGATCTACCTCTCAGAGATTCGTCATCCCTATCTCCTATCTTTACCATCCTCTTTTCAAGCGTCTTCTAGACAAAGCTCGCGAGGTTTATGGCTACCACACCGATGGTCCTCTCAAGCTCCCTTGTTCTGTCGACGATTTCCTTCATCTCCGTTGGCGAATTGAAAAAGAATCAAGCCCCAACCACCACCATAATCACCACCATCATCGCCTTCCTCACTCTTTGAACTTCCACTCTTGTTAA 303 0.462 MKVKKGWLAVQVGLEDQEEDGSTSQRFVIPISYLYHPLFKRLLDKAREVYGYHTDGPLKLPCSVDDFLHLRWRIEKESSPNHHHNHHHHRLPHSLNFHSC. 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01871 100 Pfam Auxin responsive protein 3 73 IPR003676 GO:0009733
Seca4g01871 100 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 70 IPR003676 GO:0009733
Seca4g01871 100 MobiDBLite consensus disorder prediction 82 100 - -
Seca4g01871 100 MobiDBLite consensus disorder prediction 78 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01871 Seca-Chr4 31298850 31299152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01871 3 75 Calmodulin-binding Proteins AT3G43120 46.575 8.37e-14 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01871 K14488 - gmx:100809305 176.022