Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01838 ATGATCCTGAATTTTGCAAAAATGCCAAAGTATCAAGGTGAAGAAGAGACAGGAAGAGCACCAAAGGGGCAATTTGTTGTTTATGTGGGAGAAGAACTAAAAAGGTTTACCTTACCACTATCTTACTTGAAGAACCCCATTTTCCAGTTACTGTTGGAGAAATCCGCAGAGGTATATGGGTTTAGAAACTCGAGAGGCATAGTCCTTCCATGTGATGAATCAACCTTTGAAAGGCTCATTCAAGGTTGA 249 0.4016 MILNFAKMPKYQGEEETGRAPKGQFVVYVGEELKRFTLPLSYLKNPIFQLLLEKSAEVYGFRNSRGIVLPCDESTFERLIQG. 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01838 82 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 19 79 IPR003676 GO:0009733
Seca4g01838 82 Pfam Auxin responsive protein 14 80 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01838 Seca-Chr4 30553819 30554067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01838 12 81 Calmodulin-binding Proteins AT5G20810 44.286 1.61e-16 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01838 K14488 - nnu:104593708 100.523