Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01836 ATGGAACAGTGGGGTGTTCATCGTCAAGCAATGTTCATTGGCCAGCATGAGGAAGATGGGAGTCAACTTCCTTCTGATATTTATAAGGAAGAGGACTCAAATGATGAAGAGATAAATATTAAAACTGAACCTGTCTTTCTTCCGGAAATTAAGAAAAGGAAGCGCCTTAGCCTTAGTCAGCTTAGAGAGGTGAAAGAGGAGTCATGTGGGAGGCAAAGCAGTAGCAAGCAAAAGACAAAGAAGCATGAAAGTAGGGACAGGTGGTCAGCTGAGAGGTATAAGTTGGCTGAGAAAAACATGTGGGAGGTGTTAAAGGCAGAAGGTGCGACTTTTGAGAACCCAATAACCCGACCTGCACTAAGATTGGCTGCTCGTAAACACATCGGTGATACTGGACTTTTAGACCACTTACTAAAACACATTGATGGTAAAGTGGCACCTGGAGGGACTGAGAGGTTCCGAAGATGGTTCAACACCAATGGAATCATGGAGTATTGGTTGGAGAGTGCTGAATTGGACAAGGTCCGCCAGGACGCAGGGGTGCAGGACCCTTACTGGATACCACCATCTACTTTTAGGGCAGGCAGTGCCTCCTGTCAGAACACTGATTCTTCTGGTGAATTGAAACTGCTTAAAATAGAAATGGCCAAAATGAAGAATTTGCATAGCAGAGATATGCAGGAGCTCATTGCCAAGAACCAACAGAAAAGTGAAATTAGTATGATGGAGGAGAATCACAAGGAATTTGTGAAATGGAAAGCTATGACTGACCACCACCTAACTGAAATCATGACTTCGTTGAAGGGTGTGCAGGGAAAGTATGGTGAATTGGTGATCTGGAAAACTAAAGTTGAGCAACAGCTTGTGGAAATAACAAATAAATTGAATGATCTCCAAGCATCAAAGGAATGCACCACTTTCAGTCCTCCTTCAGAAAGATGGAAAGATTGGATAGAAGGTACTAACCTAGAGAATATTCAAGAGGATGCGTTTGCAACTTGGATTGGGAGTTCAGAACTACTTAATGTCCCACAAGAGGTTGTACTTGAAGTTCCCAACTCAGCCATACCAACCCAGCCACTCAATGAAGAACTGACTAATAAGAAGAGTGATGTGCTGGAGTTGGTGCCAATAAGGCAAGAAGATCAACCTAATGTGACCCCTGATTCTTCTACAACTGTTAATTCGAAGTCAGACCTTGACAACTCATTGATGATGTTTCAGGAAATGTTTATGGATTTATTCAAATGGAAAGAAAGAATTGAGCAGCAGCTATTGCAGGTATCAAACACTGTATCTGCTATGCTGGCAATGAAGTAG 1320 0.4265 MEQWGVHRQAMFIGQHEEDGSQLPSDIYKEEDSNDEEINIKTEPVFLPEIKKRKRLSLSQLREVKEESCGRQSSSKQKTKKHESRDRWSAERYKLAEKNMWEVLKAEGATFENPITRPALRLAARKHIGDTGLLDHLLKHIDGKVAPGGTERFRRWFNTNGIMEYWLESAELDKVRQDAGVQDPYWIPPSTFRAGSASCQNTDSSGELKLLKIEMAKMKNLHSRDMQELIAKNQQKSEISMMEENHKEFVKWKAMTDHHLTEIMTSLKGVQGKYGELVIWKTKVEQQLVEITNKLNDLQASKECTTFSPPSERWKDWIEGTNLENIQEDAFATWIGSSELLNVPQEVVLEVPNSAIPTQPLNEELTNKKSDVLELVPIRQEDQPNVTPDSSTTVNSKSDLDNSLMMFQEMFMDLFKWKERIEQQLLQVSNTVSAMLAMK. 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01836 439 Coils Coil 281 301 - -
Seca4g01836 439 PANTHER PROTEIN DYAD 1 438 IPR044221 GO:0007131|GO:0051177|GO:0051321
Seca4g01836 439 MobiDBLite consensus disorder prediction 61 88 - -
Seca4g01836 439 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01836 Seca-Chr4 30530927 30535100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01836 87 168 PHD Transcription Factor Family AT5G22260 40.964 4.78e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01836 - - gmx:100806484 714.146