Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01780 ATGAATTTAAATGAGACGTTATTCCAAGCAATAATTTTTGTCAATTCATCAGCCTATAGTTCACATTTTAACGTTTGCATTTCAACTCCGCCCTATATTCTCTCCGATGGCATATGGGGAGCACACATGTCAGAAAGGCCACCATCAAAATCGTCTTTCCCAATATTCCTTCTTCAATTCATTGTAATTTATGCTACAACACGGCTTTTTTATTTCCCTGTGAAGATGATGGGTTTACCTGTGCTCATTTCACAAATAATAGCTGGGCTAATTCTAGGACCATCGCTGCCTGTATTGGAGGAAATTAAGGTGGCACTGTTTCCTTATGGAAGTCAAGATACACTTGCAACAATAACATCATTTGGTTATATATTATTCCTTTTTGAGACTGGTGTGAAAATGGATTGTAGCATGATCCTCAGAACAGGGAAAAAAGGATGGGCCATGGCAATTTTCGGATTGATGACACCTCTGTTAATTGGTTTTGCATCTCAGCACACCTTTCCTGCATTTTTAAAAACAGCTTTAGAAGAAAATGTCAATCAAGCCCGGATTATAATGATAGTGCACAATACAACTTCATTTGCAATGATTGCTTCAGTCCTCAATGACCTTAAACTACTAAACACTGAACTTGGCAGATTGGCATTATCTAGTGCATTGGTGGGTGACATATTGAGTAGCATTCTTATAACTATTTCCTCAGGCTTGATAAATGAACATAACTTGATAAAAGTTGGTTTGAGGCTAGTATCTTTATGTGTCTTGGTAATGGTCATTATGTTTGTCTATCGTCCTGCAATGTTTAAGGTCATTGATAACACACCAGAAGGAAAAGATGTGGATGATATTTATGTCCACTTTATCATTGGAATTCTCTTTTCTTTGGTTTGGTTTTCATTACCTTTGGAAAGGGGATCCATGGCTCTGCCTTTTCTTTTTGGATTGGCTACACCAGAAGGACCTCCACTAGGATCTACCTTGATTAAAAGGACTCATTTGTTAGGCACCAAATTGCTTTTGCCAATCTTCTTGACTACCTGTGCAATGAAGGTAGAAGCTGACTTCTTGAAATTATCATCATCAGCATTTTTAATTGCTACCTTCATTGTCCTTTTGGGTCATGGAATCAAAATGGTAGCATGCCTTGTATCTTCACTCCTTTTCAACATGCCTCTAAAGGATGGTTTGGCTCTAGCCTTCCTTTTCAACTTCAAAGGTGCCGTGGAAGTAGTCATGTACTCTACAGCATTGGACAGAAGTGTAATGAACTCTCCCCTCCTCAGCTTCTACACAAACACACACACACATTTTGTGCAGGATCTCTATCCTATTACTTATGCAGTGCTTATGACAGTAATGATGATTTCAAGCACCATTTCACAACTGTTAGTGAAATTTTTGTATGATCCTTCAAGGAAATATGCTGGCTATCAAAAAAGGAACATTTTTAGTTTGAAGCCAAACTCTGATCTTAGGATACAAGTTTGTATTCATAAACAACACCACATAACTCCTATCACCAGTGTTCTTGATCTATGTTACCCAACAGCAGAGGAACCTATCATTGTTGATGTCATGCATTTAATTGAGTTAGTTGGAAGGACCTCACCCATTTTCATTACTCACAAGAAGAAGAAAGTTGTTGCTGAAGACTCACAAAACTCCTACTCTTACAATGTCATTCTTGCTTTCAAACTTCTAGAAGATGAGAAACAAGGTGCAGTAGTAGTAAACCCCTACACAGCCATATCTCCACCTAACTTAATGTATGAAGATGTGTGCAATCTTGCATTAGACAAAGTTTCATCCATTATAATTCTTCCTTTTCATCGAAAATGGACCGCCTGTGGCAGAGTTGAGTATGATGACAAGGACATGAGGACTTTAAATTGCATGGTGTTGGAAAGGGCTCCATGCTCAGTTGGAATATTAGTCACTCGAGCAATTCATCAAACAGGTACATCGCTTCAATTAGCACTGATATTTTTGGGTGGAAATGATGATAGAGAGGCTTTATGCTTGGCAAATAGAGCAGCCAGAGACCCTAGTGTTAATCTTATGGTGTATCACATTGTAAGAAAGGACAATGATGAAAAACAAGACTTGGGGGCAGTGCTTGATAATGCAATGTTGAAAGATGTTAAGAAAGCACACTCTGATATGGGAAATATAAGTTATAGAGAAATAGAAGTGGAGGGTGGGTCCCAAACAGTTTCTATTCTTCGTCAAGTGGTGGATGAGCATGATTTTATTATAGTTGGGAGAAGACATGGCATCAACTCTCCTCAGACTACAGGGCTTCAGCAATGGAGTGAGTTTTCAGAGTTAGGTTTGATAGGAGATTATCTTGCTTCAGCGGATCTTAACAGCAAATCATCTATTTTGGTGGTGCAACAACAACAACTGTCCCTCTAG 2418 0.3859 MNLNETLFQAIIFVNSSAYSSHFNVCISTPPYILSDGIWGAHMSERPPSKSSFPIFLLQFIVIYATTRLFYFPVKMMGLPVLISQIIAGLILGPSLPVLEEIKVALFPYGSQDTLATITSFGYILFLFETGVKMDCSMILRTGKKGWAMAIFGLMTPLLIGFASQHTFPAFLKTALEENVNQARIIMIVHNTTSFAMIASVLNDLKLLNTELGRLALSSALVGDILSSILITISSGLINEHNLIKVGLRLVSLCVLVMVIMFVYRPAMFKVIDNTPEGKDVDDIYVHFIIGILFSLVWFSLPLERGSMALPFLFGLATPEGPPLGSTLIKRTHLLGTKLLLPIFLTTCAMKVEADFLKLSSSAFLIATFIVLLGHGIKMVACLVSSLLFNMPLKDGLALAFLFNFKGAVEVVMYSTALDRSVMNSPLLSFYTNTHTHFVQDLYPITYAVLMTVMMISSTISQLLVKFLYDPSRKYAGYQKRNIFSLKPNSDLRIQVCIHKQHHITPITSVLDLCYPTAEEPIIVDVMHLIELVGRTSPIFITHKKKKVVAEDSQNSYSYNVILAFKLLEDEKQGAVVVNPYTAISPPNLMYEDVCNLALDKVSSIIILPFHRKWTACGRVEYDDKDMRTLNCMVLERAPCSVGILVTRAIHQTGTSLQLALIFLGGNDDREALCLANRAARDPSVNLMVYHIVRKDNDEKQDLGAVLDNAMLKDVKKAHSDMGNISYREIEVEGGSQTVSILRQVVDEHDFIIVGRRHGINSPQTTGLQQWSEFSELGLIGDYLASADLNSKSSILVVQQQQLSL. 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01780 805 Gene3D - 55 476 IPR038770 -
Seca4g01780 805 PANTHER CATION/H + ANTIPORTER 47 802 - -
Seca4g01780 805 Pfam Sodium/hydrogen exchanger family 62 464 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01780 Seca-Chr4 29235577 29238671 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01780 25 803 Antiporter Super Family AT5G22900 32.974 7.96e-141 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01780 K26731 - gmx:100784321 808.905