Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01777 ATGATTGAAATGAACACAAAGAACAAGATGTTCAATCTGAAAGGCATAGCTTTGGGTAATCCAGTTCTAGAATATGCCACTGATTTCAATTCAAGGGCTGAGTTCTTCTGGTCTCATGGACTAATATCAGATTCAACATACAACATGTTCACTACAGTGTGTAATTACTCTCGGTATGTCAGTGAGTACTATAGAGACTCAGTTTCACCTCTTTGTTCAAAGGTTATGGGGCAAGTGAGCAAAGAAACTAGTAAATTTGTGGACAAATATGATGTCACCCTTGATGTTTGCATTTCCTCAGTGCTATCACAATCCAAGGTTATTTGTCCTCAAACTCAACAAGCAAATGAGAGGATAGATGTGTGTGTAGATGACAAGGTTACAAACTACTTAAACAGGAAAGATGTACAAGAAGCACTTCATGCAAAGCTTGTTGGAGTTCGCAAGTGGGATGTTTGCAGCAACATACTGGACTATGATATGCTCAATTTGGAAGTCCCTACACTTCCTGTTGTTGGATCACTGATAAAGGCTGGAGTTCGGGTCTTAATTTACAGTGGAGATCAAGATTCAGTAATTCCACTGACTGGAAGCCGCACCTTAGTTCAAAAGTTGGCAAGAAAATTAGGACTAAATACAACAGTTCCTTACAGAGTATGGTTTGAAGGCCAGCAGGTTGGTGGATGGACTCAAGTTTATGACAATATCCTTTCATTTGCCACTGTTAGAGGTGCCTCCCATGAAGCCCCTTTCTCACAGCCTGAAAGATCACTAGTGCTATTCAAGTCATTCTTGAAAGGCAGGCCTTTGCCTGAATTTTTCTGA 825 0.4036 MIEMNTKNKMFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYNMFTTVCNYSRYVSEYYRDSVSPLCSKVMGQVSKETSKFVDKYDVTLDVCISSVLSQSKVICPQTQQANERIDVCVDDKVTNYLNRKDVQEALHAKLVGVRKWDVCSNILDYDMLNLEVPTLPVVGSLIKAGVRVLIYSGDQDSVIPLTGSRTLVQKLARKLGLNTTVPYRVWFEGQQVGGWTQVYDNILSFATVRGASHEAPFSQPERSLVLFKSFLKGRPLPEFF. 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01777 274 Gene3D - 122 158 - -
Seca4g01777 274 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 9 254 IPR001563 GO:0004185|GO:0006508
Seca4g01777 274 Gene3D - 168 267 - -
Seca4g01777 274 Gene3D alpha/beta hydrolase 1 108 IPR029058 -
Seca4g01777 274 FunFam Carboxypeptidase 168 267 - -
Seca4g01777 274 ProSitePatterns Serine carboxypeptidases, histidine active site. 237 254 IPR033124 GO:0004185
Seca4g01777 274 Pfam Serine carboxypeptidase 6 267 IPR001563 GO:0004185|GO:0006508
Seca4g01777 274 SUPERFAMILY alpha/beta-Hydrolases 9 271 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01777 Seca-Chr4 29184282 29187812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01777 130 270 Calmodulin-binding Proteins AT2G22960 29.078 2.42e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01777 K16297 - gmx:100795668 530.791