Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01769 ATGGATGAAGGCACCTTTGGTCGAGTTTTGGAATGTTGGGATCGCCAAACTAGAGAGTATGTGGCTATCAAGGTAATTAGAAGCATACAGAAATATCGAGATGCAGCTATGCTTGAGGTTGATGTGCTTCAATGTCTAGCAAAGAATGATCGAGGAAGCTCACGCTGTGTGCAGATCCGAAATTGGTTTGATTACAGAAATCACATATGCATTGTCTTTGAGAAGCTTGGACCAAGCTTATTTGATTTTCTAAAGAGAAATAAATACTGCCCATTCCCTGTGGATCTTGTTCGTGAATTTGGACGACAGCTTTTGGAATCTGTAGCATGTCTGTGGATTTTTCTTGACCTCCTGTTATTTCTCATGTCTTATTCTCATATGATCTCTTGCTTACAGACCAACCGCATCATTTTCCTTGGCTTGCTTTGTTAG 432 0.4051 MDEGTFGRVLECWDRQTREYVAIKVIRSIQKYRDAAMLEVDVLQCLAKNDRGSSRCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVACLWIFLDLLLFLMSYSHMISCLQTNRIIFLGLLC. 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01769 143 SUPERFAMILY Protein kinase-like (PK-like) 2 111 IPR011009 -
Seca4g01769 143 Gene3D Transferase(Phosphotransferase) domain 1 49 111 - -
Seca4g01769 143 SMART serkin_6 3 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g01769 143 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 110 - -
Seca4g01769 143 Gene3D Phosphorylase Kinase; domain 1 3 75 - -
Seca4g01769 143 ProSiteProfiles Protein kinase domain profile. 1 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g01769 143 Pfam Protein kinase domain 3 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01769 Seca-Chr4 29008833 29011160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01769 4 105 EF-hand Containing Proteins AT5G22840 33.645 2.49e-14 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Seca4g01769 Pkinase 1.1e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01769 K08287 - jre:108979624 230.335