Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01756 ATGGAGGTTGTAAAGGGAAAATGGAGGAAAAATGTGATTTCGAAGGCGTGGGAGCGTTGGCGATCTTCGTTAGGAGGTGGTACTCGCAATAAGTGGTCACAATTGAAAGGTACTAATTCAGAGAATGATTATTGTGATGAGAATGAGAAGGGTCGTCAAATAGCACCTCATGGTTGCTTTTCTGTATATGTGGGACCCCAGAAACAAAGGTTTGTTGTGAAGATGGAGTTTGTTAACCACCCACTATTCCAGACACTGCTAGATGAAGCAGAATTAGAGTATGGGTTTACAAGTGATGGCCCTATTTGTCTTCCCTGCAACGTTGATTTGTTCTATAAAGTGTTGGGTGAGATGGATCTCATTCCATGTACTCGTAGAAGCATTGCTGCTAAGGCCTTATCTTTTTTAGTTCTTCACAGCCCAGCTCGTCTTCTTTGTCATACGCATAGGGGACGTCTTAGTGCATATAGTGTTATGGATTCAGAAATGCTGAAAATAAGCAGATTTGAATAG 513 0.4172 MEVVKGKWRKNVISKAWERWRSSLGGGTRNKWSQLKGTNSENDYCDENEKGRQIAPHGCFSVYVGPQKQRFVVKMEFVNHPLFQTLLDEAELEYGFTSDGPICLPCNVDLFYKVLGEMDLIPCTRRSIAAKALSFLVLHSPARLLCHTHRGRLSAYSVMDSEMLKISRFE. 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01756 170 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 36 114 IPR003676 GO:0009733
Seca4g01756 170 Pfam Auxin responsive protein 31 115 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01756 Seca-Chr4 28543482 28544379 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01756 56 116 Calmodulin-binding Proteins AT4G34750 44.262 5.86e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01756 K14488 - gmx:100793967 182.57