Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01754 ATGGCAAAAATTGAACTTCATGTAAAGCAAGGAGAACCAACTCGAGTTCAGCCTGCAGAGGAAACAGAAAAAGGGCTTTACTTTCTTTCAAACCTTGACCAGAATATTGCAGTTCCAGTTCGCACGGTTTATTGCTTCAAATCATCTTCCAGAGGAAATGAGGATGCTGCACAAGTTATTAAGGATGCCTTATCAAAGATTCTTGTTCCTTATTATCCTATGGCAGGCAAGTTGATGATTAGCACAGAAGGGAAGTTGATAGTGGATAACACAGGGGAGGGTGCTGTATTTGTTGAGGCTGAAGCAGATTGCAACATAGAAGACATTGGGGACTTAACAAAGCCTGACCCTGATACTCTTGAGAAACTGGTTTATGACACCCCTGGTGCTCAGAACATACTTGAGATGCCTCTTATGGCAGTTCAGGTGACAAAATTCAAATGTGGGGGATTCACTTTGGGGCTAAACATGATTCATTGCATGAAAGATGGACTATGTGCCATGGAGTTTGTGAATGCATGGAGTGAGGCAGCTAGAGGGTTGGACTTAAAGATTCAACCATTTCTTGATCGAACCATAATCAAAGCACGTAGCCCTCCTAAAATAGAGTTTCAACACCATGAATTTGATGAAATTGAAGATATATCAAATACTAAAAAACTTTATGAAGAAGAAAAGATGCTCTACAGGTCCTTCTGTTTCAATCATGAGAAGCTTGAATTGCTTAAGAAAAAGGCCACTGAAGATGGGGTAATAGAAAAGTGCTCTACTTTTGAAGCCCTCTCAGGTTTTGTATGGAGAGCTCGAACTGAAGCCTTAAAGATGCATCCTGATCAACAAACAAAGCTACTCTTTGCAGTTGATGGAAGGTCAAGATTTGTGCCCCCAATACCAGAAGGATACTTTGGCAATGCTATAGTGCTGACAAATTCCCTGTGTAAGGCAGGTGAACTATTGAATAATCCTCTGTCATTTACAGTGGGATTGATTCGCAAGGCAATTGACATGGTCACAGATAGTTATATGAGATCTGCTATTGATTATTTTGAAGTCAAAAGAGCTAGGCCTTCCTTAACAGCCACCCTATTGATCACAACTTGGACTAGGCTATCTTTCCACACTACAGACTTTGGTTGGGGAGAACCTTTATGTTCTGGTCCTGTGACCTTGCCAGAGAGAGAAGTTATTTTGTTCTTATCACACGGTCAAGAAAGGAAAAGCATAAATGTGCTCCTGGGTTTACCTGCTTCTGCCATGGAATTTTTTGAAGCACTGATGATGCAAGTGTGA 1290 0.4101 MAKIELHVKQGEPTRVQPAEETEKGLYFLSNLDQNIAVPVRTVYCFKSSSRGNEDAAQVIKDALSKILVPYYPMAGKLMISTEGKLIVDNTGEGAVFVEAEADCNIEDIGDLTKPDPDTLEKLVYDTPGAQNILEMPLMAVQVTKFKCGGFTLGLNMIHCMKDGLCAMEFVNAWSEAARGLDLKIQPFLDRTIIKARSPPKIEFQHHEFDEIEDISNTKKLYEEEKMLYRSFCFNHEKLELLKKKATEDGVIEKCSTFEALSGFVWRARTEALKMHPDQQTKLLFAVDGRSRFVPPIPEGYFGNAIVLTNSLCKAGELLNNPLSFTVGLIRKAIDMVTDSYMRSAIDYFEVKRARPSLTATLLITTWTRLSFHTTDFGWGEPLCSGPVTLPEREVILFLSHGQERKSINVLLGLPASAMEFFEALMMQV. 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01754 429 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 15 425 - -
Seca4g01754 429 FunFam Spermidine hydroxycinnamoyl transferase 6 209 - -
Seca4g01754 429 Gene3D - 2 210 IPR023213 -
Seca4g01754 429 FunFam Tryptamine hydroxycinnamoyl transferase 213 427 - -
Seca4g01754 429 Gene3D - 211 429 IPR023213 -
Seca4g01754 429 Pfam Transferase family 7 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01754 Seca-Chr4 28511162 28513111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01754 14 429 Monolignol Biosynthesis Gene Families AT5G48930 37.037 6.10e-93 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01754 K15400 - gmx:100794490 756.903