Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01664 ATGACTGCAAATGTTTTAGTAACCAAAATGGCAGGAGATTCACCCACCTTAATTGGAGCCTGGGGCAGTCCATTCGCCCTGAGGGTGAAGTGGGCACTTGAACTAAAAGGGATTCAGTACCAGTATGTGGAAGAAGATCTCCACAATAAGAGTGCCATGCTCCTGCAGTATAACCCTGTCTACAAGAAGGTACCAGTTCTTGTGCATCAGGGTAAGCCCCTCGCAGAATCTCTAGTCATTCTTGAGTATATTGATGAGACCTGGAAGCAAAATCCTCTTCTTCCACATGATCCCTATGAAAGGGCCAAGGCACGATTCTGGTCCAGATTCACTGATGAAAAGTTTATGCCAGCACTTATGGCAACCTTTTCCAAAGGAGCAGGGGAGGAACAAGAGAAGGCAGCACAAGAAGTTAGAGAGATTCTGAAGACCCTTGAAAGTGGACTTGAGGGAAAGCGATACTTTGGAGGTGAAAAAATAGGCTTCGCTGATATTGCTATTGGGTGGCTTGGATTCTGGGTAAGAGTTATGGAGGAAATTTTGGGCATAAACCTAATTGATACAGAGTCCATGGCCAAGCTTAATGCTTGGTTCGATGATTTTCTTGACCTTCCTGTTATCAAAGAATGCATGCCGCCTCGTGATAAACTGCTTGAGCTCAACAAGGCCTTCCACAAGTTCTTGACATCTTCATCTACTTAA 702 0.4473 MTANVLVTKMAGDSPTLIGAWGSPFALRVKWALELKGIQYQYVEEDLHNKSAMLLQYNPVYKKVPVLVHQGKPLAESLVILEYIDETWKQNPLLPHDPYERAKARFWSRFTDEKFMPALMATFSKGAGEEQEKAAQEVREILKTLESGLEGKRYFGGEKIGFADIAIGWLGFWVRVMEEILGINLIDTESMAKLNAWFDDFLDLPVIKECMPPRDKLLELNKAFHKFLTSSST. 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01664 233 SFLD Glutathione Transferase (cytosolic) 14 230 IPR040079 -
Seca4g01664 233 CDD GST_N_Tau 17 88 - -
Seca4g01664 233 FunFam Tau class glutathione S-transferase 94 231 - -
Seca4g01664 233 Pfam Glutathione S-transferase, C-terminal domain 122 205 IPR004046 -
Seca4g01664 233 FunFam Tau class glutathione S-transferase 10 96 - -
Seca4g01664 233 Gene3D Glutaredoxin 10 93 - -
Seca4g01664 233 Gene3D - 94 232 - -
Seca4g01664 233 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 13 92 IPR004045 -
Seca4g01664 233 SUPERFAMILY Thioredoxin-like 15 116 IPR036249 -
Seca4g01664 233 Pfam Glutathione S-transferase, N-terminal domain 16 86 IPR004045 -
Seca4g01664 233 SUPERFAMILY GST C-terminal domain-like 86 227 IPR036282 -
Seca4g01664 233 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 97 224 IPR010987 -
Seca4g01664 233 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 18 219 IPR045073 -
Seca4g01664 233 CDD GST_C_Tau 98 224 IPR045074 GO:0004364|GO:0006749
Seca4g01664 233 SFLD Main.3: Omega- and Tau-like 14 230 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01664 Seca-Chr4 27071064 27072434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01664 17 223 Glutathione S-transferase Gene Family AT2G29420 47.343 5.66e-72 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01664 K00799 - gmx:100813267 366.696