Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01592 ATGTTTCAGGCCAGAAGAGCACTACGAGCTTTGAAAGGATTGGTTAGGCTTCAGGCCCTTGTAAAAGGCCATGCGGTAAGAAAACAAGCTGCTATAAATCTCCGATTTATGCAAGCATTGGTGAGGATACAAGCTCCTTTTCGGGCAAGGCATGTTTGCTTATTCCCTCTAGCAGATATTTAG 183 0.4426 MFQARRALRALKGLVRLQALVKGHAVRKQAAINLRFMQALVRIQAPFRARHVCLFPLADI. 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01592 60 ProSiteProfiles IQ motif profile. 12 39 IPR000048 GO:0005515
Seca4g01592 60 PANTHER IQ-DOMAIN 5-RELATED 2 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01592 Seca-Chr4 25801870 25802052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01592 2 52 IQD Protein Family AT3G49260 66.667 2.12e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01592 - - gmx:100781346 86.2705