Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01584 ATGGGAGAAGATTGTGGAACCTGGATACCACATATGCAATTTGGATGGCAATCACCAAATTTGAGTCCCCTCAATGTGGGGAAGCAGGATGGTATTTCTGCAGTTATGAACCATGGCATCAATATGGTTTCAAACAATGAGACAATGCCAGCTTTCATGTCCTCTGCAATACCTCATTTGCAATTAGGACATGCTAATGAACCACCCCATGGTTGGTTTTATTGTTTGCCTCGCTATCAACAGGGATTTAGTCCTGCTCCAGACTTCACTGCTGAGGGAAAAACCCCTGCTGACCATGTGAAAAGTTTTAGGGATAAAATTGCTCCTTATGGTGAATCAAGCTCTCCTCAGAAACAATTCCTTGTTGTTGATCAGACTGGTGGTCGAACAACCATTGTTTATAGTTCTAGGTTTGGGAGTCCCAATGAGTGCCTCACTTCTTGGCATTCAAAATTGCATGGTTCTAACTATTGGAGTGGGAATGACCCTTCTTTTAAAGGAGATTTGAATTTGAATTTGAATCACATGACTGAGCAAACTTTGGCTGATCAAGTTGATGAGAATCAGGGAACTGGTACTGAAAGCGAGATGCATGAAGACACTGAAGAAATTAATGCATTGCTTTACTCGGACAGTGATGGCTATTCTACTGAGGATGAGGATGATGATGATGAAGTTACTAGCACAGGACACTCTCCCAGTACAATGACCACTCATGAGAACCATAAAACCTTAAGGGCAACCGCAGAAGAAGTTGCGAGCTCTGCTGGGAAAGCTAAGAAGAGGAAGTTAATGGATGGTTATTATGATGACACACAGCTCATGGATACTGCTAGTTCTCTGAACCTGAACAAATCCTTTACCGTGGGAGATGATGCAGAATCAAGATGTTCTGGTAGCAACAATGAAAGATCATCAGGTGAAATGGGTTCCTTGAAGAAGATGAGAAAGGAGAAGATAAGAGAAGTTCTAAGTGTGCTTCAGAGCATAATCCCTGGCGTGAAGGATAAGGACCCAGTCATGCTTCTAGATGATGCCATACATTGCTTGAAATCCTTGAAACACAAGGCTAAAGAGCTCGGACTCAATGCCTTATAA 1098 0.4235 MGEDCGTWIPHMQFGWQSPNLSPLNVGKQDGISAVMNHGINMVSNNETMPAFMSSAIPHLQLGHANEPPHGWFYCLPRYQQGFSPAPDFTAEGKTPADHVKSFRDKIAPYGESSSPQKQFLVVDQTGGRTTIVYSSRFGSPNECLTSWHSKLHGSNYWSGNDPSFKGDLNLNLNHMTEQTLADQVDENQGTGTESEMHEDTEEINALLYSDSDGYSTEDEDDDDEVTSTGHSPSTMTTHENHKTLRATAEEVASSAGKAKKRKLMDGYYDDTQLMDTASSLNLNKSFTVGDDAESRCSGSNNERSSGEMGSLKKMRKEKIREVLSVLQSIIPGVKDKDPVMLLDDAIHCLKSLKHKAKELGLNAL. 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01584 365 PANTHER TRANSCRIPTION FACTOR BHLH145 8 363 IPR037546 -
Seca4g01584 365 MobiDBLite consensus disorder prediction 290 308 - -
Seca4g01584 365 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 304 353 IPR011598 GO:0046983
Seca4g01584 365 MobiDBLite consensus disorder prediction 290 313 - -
Seca4g01584 365 MobiDBLite consensus disorder prediction 212 242 - -
Seca4g01584 365 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 314 360 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01584 Seca-Chr4 25702772 25704960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01584 71 358 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 32.082 4.46e-24 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01584 - - gmx:102668102 529.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01584 4 25702772 25704960 Seca4g01584 4 25702772 25704960 ECH
Seca4g01584 4 25702772 25704960 Seca8g01875 8 38809459 38811105 PCT