Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01566 ATGGGTGTCATGAATCAATATCTGGATGCTGCAGTTGCCGGAGTTGTGGGAATAGTACTATTTTTAATTTCTCTCTTCGTTTACTCTACGAACAGAGGTAGATCACGTGATACCCCCAAGCAGCCACCCTTAGCCGCTGGTGCCTGGCCCTTCATCGGTCACCTTCCCCTCTTAGTTGATTCCCGTCACCCTCAATACATCATCTTCGGAGCCTTAGCCGACAAATATGGACCAATATTCACCATCCGAATCGGCGTGCACACAGCTGTGGTGGTCAACACTTGGGAGCTAGCCAAGGAGTGTTTCACCACTCTCGATGCCATTGTCTCCTCTCGTCCCAAATTCACCGCTGCGAAAATCTTGGGACACGACTATGCCAGTTTTGCCTTCACTCCTTACGGAGACTTCTGGCGTTTGATGCGTAAGATCACTGCTTCAGATTTACTCTCCACTCGCCGTCTCGAATCCCTTCGAGATGTCAGAGCTTCCGAGTTGCAGAGCGCGTTGCAAGAGCTATACAGATCGAAAACACGATTGGTGGAGATGAAGCAGTGGCTGGGAGACATGAATCTCAACGTGATTTTAACGATGATTGCTGGGAAGCGATTCTCCAACAGAGATGCAGATGAGAAACAGGTGAGGCGAATTCGAAGGGTTTTCAGAGAGTTCTTTCGTTTGACAGGGTTGCTTGTGGTTGGCGATGCAATTCCAGTTCTTGGATGGGTTGATTTGGGAGGTCAAGTGAAGGAGATGAAGAAAACGGCTAAAGAAATGGACGGCATAATTTGTGAATGGTTAGAAGAACATCGCCAGAAAAGAGATTCAGATGAGACTAAAACAGAGCAAGACTTCATTGATGTGTTGCTCTCTGTTCTTGACGGCGTTGACCTTTCTGGTTATGACGCTGACACCGTCAACAAAGCTACTTGCTTGACACTAATGGCTGGGGCAACGGATACTACAACAGTTACTTTGATATGGGCACTGTCGTTATTGTTGAATAATCGTCATGCTATGAAGAAGGTTCAAGAAGAATTGGAGGAGCATGTGGGCAAGGAAAGACTAGTGAATGAATCAGACATTAATGACTTGGTTTACCTACAAGCGGTGGTGAAAGAAACAATGCGATTGTATCCAGCAGCGCCACTCTCTCCGCGTGAATTCACAGAGGACTGTACCTTAGGTGGGTACCATGTAAAGGCAGGTACCAGAATGATATTGAATATTTGGAAGCTGCATAGAGATCCACGTGTATGGTCAGATCCGTTAGAGTTTAAACCAGAAAGGTTTCTGAGTACTCACAAGGGTGTGGATGTGAAGGGTCACCATTTTGAGTTGCTTCCTTTTGGAGGGGGAAGAAGGTCCTGCCCTGGCATATTGTTTGGCCTTCAAATGACACATTTGGCATTAGCTGCTTTCTTGCATGCATTTGAAGTCACAACCCCGTCTAATGGCCAGGTTGATATGAGTGCCACTTGTGGACTCACAAACATCAAAACCACACCACTTGAGGTTTTAGTCAAACCTCGTTTATCATATCACCTTCTTTCTCGATGA 1557 0.4631 MGVMNQYLDAAVAGVVGIVLFLISLFVYSTNRGRSRDTPKQPPLAAGAWPFIGHLPLLVDSRHPQYIIFGALADKYGPIFTIRIGVHTAVVVNTWELAKECFTTLDAIVSSRPKFTAAKILGHDYASFAFTPYGDFWRLMRKITASDLLSTRRLESLRDVRASELQSALQELYRSKTRLVEMKQWLGDMNLNVILTMIAGKRFSNRDADEKQVRRIRRVFREFFRLTGLLVVGDAIPVLGWVDLGGQVKEMKKTAKEMDGIICEWLEEHRQKRDSDETKTEQDFIDVLLSVLDGVDLSGYDADTVNKATCLTLMAGATDTTTVTLIWALSLLLNNRHAMKKVQEELEEHVGKERLVNESDINDLVYLQAVVKETMRLYPAAPLSPREFTEDCTLGGYHVKAGTRMILNIWKLHRDPRVWSDPLEFKPERFLSTHKGVDVKGHHFELLPFGGGRRSCPGILFGLQMTHLALAAFLHAFEVTTPSNGQVDMSATCGLTNIKTTPLEVLVKPRLSYHLLSR. 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01566 518 SUPERFAMILY Cytochrome P450 48 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01566 518 FunFam Cytochrome P450 82C4 32 508 - -
Seca4g01566 518 Gene3D Cytochrome P450 35 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01566 518 PANTHER CYTOCHROME P450 82C3-RELATED 16 515 - -
Seca4g01566 518 Pfam Cytochrome P450 46 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01566 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Seca4g01566 518 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01566 518 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01566 518 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01566 518 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01566 518 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01566 518 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01566 518 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01566 518 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01566 518 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01566 518 CDD CYP82 77 510 - -
Seca4g01566 518 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01566 518 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01566 518 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01566 Seca-Chr4 25456427 25458368 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01566 43 516 Cytochrome P450 AT4G31940 48.269 1.57e-166 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01566 - - gmx:100810391 734.176