Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01543 ATGGATACTACTTGCAATCGAGTTTTGGCACAAGGAGTACTTATTTTCCTTGTGATTGCATCACTGGCGGCAGGGAGTGAGGGCAGAAACATCTTTGTTGGAGACTCTGAAGGTTGGCGTGCGGGTACTAACTACACCGAATGGGCTATGAAAAATAGTCCCTTCCACTTAAATGACACACTGGTGTTCAAGTATCCCCCACCAGGCAATTCGACGCTTGCTCAAAGTGTGTATTTACTTCCAAACTTGTGGAGCTACACAACATGCGAATTCAGGGGAGCAAAGCTATTGGGAAGTGCAGCTGAAGGGGATGGTGAGGGCTTAAAGGTTGAGCTCAATCAGTGGAAGCCTTACTACTTTGCCTCTGCAGAAGGCAACGCCTATGATTGCATTGCTGGCCTCAACAAGTTTATCGCTGTCCCATCTACACGTTCCTTTTAG 441 0.4717 MDTTCNRVLAQGVLIFLVIASLAAGSEGRNIFVGDSEGWRAGTNYTEWAMKNSPFHLNDTLVFKYPPPGNSTLAQSVYLLPNLWSYTTCEFRGAKLLGSAAEGDGEGLKVELNQWKPYYFASAEGNAYDCIAGLNKFIAVPSTRSF. 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01543 146 Gene3D - 27 142 IPR008972 -
Seca4g01543 146 SUPERFAMILY Cupredoxins 29 140 IPR008972 -
Seca4g01543 146 ProSiteProfiles Phytocyanin domain profile. 29 142 IPR003245 GO:0009055
Seca4g01543 146 PANTHER GLYCINE-RICH PROTEIN-LIKE 27 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01543 Seca-Chr4 24933297 24934166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01543 14 143 Phytocyanin Superfamily AT4G28365 30.827 5.95e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01543 - - vra:106760467 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01543 4 24933297 24934166 Seca4g01543 4 24933297 24934166 ECH