Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01468 ATGCTTTTACTGTCCATCCAGGTCACTGAACTTGTCGATGGAGTTTTTATTGGCTGTTCCATGAACCACTGTATTGCTGATGGGACTTCCTTTTGGAATTTCTTTAATACATGGTCTCACATCTTTCAAGCTCAAGGTCAAAGGCAAGATGTTCCTATTTTGCATCCACCCATTCACAATCGATGGTTTCCAGAAGGTTGCGGTCCACTAATAAATCTTCCATTCAAACATCATGACGAGTTTATTAATAGATCTGAACCACAAAACCTCAGAGAGAGGATCTTCCACTTTTCAGCAGAGTCCATTGCGAAACTCAAAGCAAAGGCGAACTTACAATATTCAAATAGCACCAAAATCTCTTCATTCCAATCCTTATCAGCACATGTTTGGAGATCCATAACACGCGCGCGCCGCCTACCACATGATCAGAAAACCAGTTGCAGATTAGCCATAAACAATCGATCAAGAATGGAACTGCCTCTGCCGCAAGAGTACTTTGGAAACTCAATTGGTATGGTGAGTGCAGAGGCGAAGGCAGGGGAATTGCTTGAGAAGGATCTGGGATGGGCAGCATGGAAGGTTCACCTTGCTGTTGCAAACCATAACGATGAAGTGGTGCGTCAATTTCTCAAAGAATGGTTGCAATCTCCTGTTATTAACCAACTTAGTGGTCTCCACTTTGATCCTTGCAGTGTGAGGATGTCAAGTTCACCAAGGTTCAACATGTATGGGAATGAATTTGGAATGGGGAAAGTTGTGGCTGTTAGAAGTGGTTATGCAAACAAAGTGGATGGGAGCGTGACATCATTCCCAGGATATGAAGGAGGGGGAAGCATCGATTTGGCAGTGTCCCTTTTGCCTGATGCAATGAGAGCGCTGGAATCAGACGAGGAGTTCATGGAAGCAGTTTTTGTGTCCAATCCCTTTTACTAG 933 0.4394 MLLLSIQVTELVDGVFIGCSMNHCIADGTSFWNFFNTWSHIFQAQGQRQDVPILHPPIHNRWFPEGCGPLINLPFKHHDEFINRSEPQNLRERIFHFSAESIAKLKAKANLQYSNSTKISSFQSLSAHVWRSITRARRLPHDQKTSCRLAINNRSRMELPLPQEYFGNSIGMVSAEAKAGELLEKDLGWAAWKVHLAVANHNDEVVRQFLKEWLQSPVINQLSGLHFDPCSVRMSSSPRFNMYGNEFGMGKVVAVRSGYANKVDGSVTSFPGYEGGGSIDLAVSLLPDAMRALESDEEFMEAVFVSNPFY. 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01468 310 Gene3D - 76 295 IPR023213 -
Seca4g01468 310 FunFam Tryptamine hydroxycinnamoyl transferase 76 296 - -
Seca4g01468 310 Pfam Transferase family 3 300 - -
Seca4g01468 310 Gene3D - 1 70 IPR023213 -
Seca4g01468 310 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01468 Seca-Chr4 23774564 23775517 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01468 3 294 Monolignol Biosynthesis Gene Families AT5G48930 31.373 6.15e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01468 - - gmx:100787276 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01468 4 23774564 23775517 Seca4g01468 4 23774564 23775517 ECH