Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01466 ATGCAAGCCAACTTTGCTGAACTTGTTGATGGAGTTTTTATTGGCTGTTCTATGAACCACTGTATTGCTGATGGGACTTCCTATTGGAATTTCTTTAATACATGGTCTCACATCTTTCAAGCTCAAGCTCAAGGAGAAGGATTTGAAGCACCAAAACTGAGAGAGAGGATCTTCCACTTTTCAGCAGAGTCCATTGCGAAACTCAAAGCAAAGGCCAACTTTGAGTCTAACACAACCAAAATCTCTTCATTCCAATCTTTGTCAGCACTCGTTTGGAGATCCATAACTCGCGCACGTCGCTCGCCAGATGATCAGAGAACCACTTGCAAGCTGGCAACAAACAATCGATCAAGAATGGATCCACCTCTGCCTCAGGAATATTTTGGAAACTCAATTTATGCAGTTAGTGCAGAGGCAACGGTAGGGCAATTGCTTGAAAACAATCTGGGATGGGCAGCATGGAAGTTACATCTGGCTGTTGCAAATCATAACGACAGAGTGGTACGACAGTGGCATAAAGAGTGTTCACCAAGGTTCAACATGTATGGAAATGAATTTGGAATGGGGAAATCTGTGGCTGTTCGAAGTGGGTATGCTAACAAATTTGATGGAAAAGTGACATCATATCCGGGCCATGAAGGAGGGGGAAGTATTGATTTAGAAATCTGTCTTACGCCATATACAATGAATGCGCTTGAATCAGACAAGGAGTTCCTGAACGCAGATTCAGAGTCTAATCCCCTGTAA 747 0.4311 MQANFAELVDGVFIGCSMNHCIADGTSYWNFFNTWSHIFQAQAQGEGFEAPKLRERIFHFSAESIAKLKAKANFESNTTKISSFQSLSALVWRSITRARRSPDDQRTTCKLATNNRSRMDPPLPQEYFGNSIYAVSAEATVGQLLENNLGWAAWKLHLAVANHNDRVVRQWHKECSPRFNMYGNEFGMGKSVAVRSGYANKFDGKVTSYPGHEGGGSIDLEICLTPYTMNALESDKEFLNADSESNPL. 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01466 248 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 5 239 - -
Seca4g01466 248 Pfam Transferase family 8 41 - -
Seca4g01466 248 Pfam Transferase family 176 238 - -
Seca4g01466 248 Pfam Transferase family 52 168 - -
Seca4g01466 248 Gene3D - 1 48 IPR023213 -
Seca4g01466 248 Gene3D - 49 235 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01466 Seca-Chr4 23756738 23757659 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01466 11 233 Monolignol Biosynthesis Gene Families AT5G48930 26.644 8.94e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01466 - - gmx:100789881 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01466 4 23756738 23757659 Seca4g01466 4 23756738 23757659 ECH