Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01435 ATGGAAAGTGGATTGCCTATGCTTAATTGTCTCTTGCAGCAGACTCTGAGAAGCATTTGCACCTCTCCAAATTCTTCCACTTCTTCTAAGTGGGTATATGCTGTCTTCTGGAGGATATTACCTAGAAACTTTCCTCCACCAAGGTGGGAATTTGGAGGAACTGCTCTTGATCGCTCAAAGGGAAATAAGAGAAACTGGATCCTTGTATGGGAAGATGGTTTCTGTGATTTTGACGAATGTGAACAAAGGAGGAGTGGATACTTGAACGGCAGGTTTGGAGCTGAAGTATTCTTCAAAATGTCTCATGAGGTTTATAATTATGGAGAGGGACTACTAGGAAAAGTGGCTGCAGATAATGGTCACAAATGGGTCTACAGTGACAATCACAATGAGTGTGAACCTAGCTATATTGCTTCATGGAATGCTTCTGTGGAACCACAACCAAAAGCGTGGGAGTTTCAGTTTAGTTCAGGTATTCAGAGTATTGTGGTAATAGCTGTTAGAGAAGGCGTAGTGCAACTAGGCTCTTTCAACAGGATTGCAGAGGACCTCAATCTAGTGATCAACATACAAAGGAAATTCAGCTACCTTCAAAGCATACCAGGTGTATTCGCTATTCAAAGACCATACCTACCCATCCAACATCCATACACTGTGAAACCCAGTTTCCAGATGATTGAAACCAATGGAATGGCTCTATCTACCTACGATATGAGCCAAGTAACAGCGATCGAAAGATCTAACTGTTCTAATTCCATGATAGCTACTATAGACTTGGGTTGGAACCCTTCTCACTCTCAAATTGGAACAACACTTCCTCCTCCTTTGCCAAGTAGCATGTCTTGCAGTCTTGGAGTTCTCCTATCAAAACTACCCTCTGTGATCCCTTCCCATAATTCTTCCAATCAAGTTCCTGATGCAGGAATGCAAAGCACTAGCGAGAGAGTGAAGATTGAGGACTGTGGATTTGATGGTGATCAGAAAGGGAAAGTGGTTTCACTGAACAAATAG 1011 0.4243 MESGLPMLNCLLQQTLRSICTSPNSSTSSKWVYAVFWRILPRNFPPPRWEFGGTALDRSKGNKRNWILVWEDGFCDFDECEQRRSGYLNGRFGAEVFFKMSHEVYNYGEGLLGKVAADNGHKWVYSDNHNECEPSYIASWNASVEPQPKAWEFQFSSGIQSIVVIAVREGVVQLGSFNRIAEDLNLVINIQRKFSYLQSIPGVFAIQRPYLPIQHPYTVKPSFQMIETNGMALSTYDMSQVTAIERSNCSNSMIATIDLGWNPSHSQIGTTLPPPLPSSMSCSLGVLLSKLPSVIPSHNSSNQVPDAGMQSTSERVKIEDCGFDGDQKGKVVSLNK. 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01435 336 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 81 IPR025610 -
Seca4g01435 336 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 95 194 IPR025610 -
Seca4g01435 336 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01435 Seca-Chr4 23152420 23155298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01435 13 198 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 32.086 2.44e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01435 - - lja:Lj1g3v1686740.1 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01435 4 23152420 23155298 Seca4g01435 4 23152420 23155298 ECH