Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01396 ATGAATCATTACAATTGTATATGGCCAATAAGCCCGTTGCATTCTGTTCTAGTGAAAGAAGCTGATATTGCCAAGATCAAAATATCCACATTTAGCGAAAGGTGCCACCTGGATTTGAAGTCAGAGAAACCAGTTGACCATGATTCCCAGATTAGCGACCTATCTTCACATGATGGAGAGGTTGCAGAGGAGTACAAGCTTCTCTCTGTTTCCTACTATGACAGGTTCCTATCTGTGAACTCTGTCACTAAAATCCAGGTTGTGAAAATGGAAGCTGACATACTCAAGTCCCTAAAATTTGAACTGGGGAGCCCTACTGTTAAGACTTTCTTAAGGCAAGAAGTGCTGAGATCTATTTTTTTTTTTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATGTTAATGCAAATGCCAAATATCTAAACCTAATTGAAGTGACAATGGATTAA 480 0.3375 MNHYNCIWPISPLHSVLVKEADIAKIKISTFSERCHLDLKSEKPVDHDSQISDLSSHDGEVAEEYKLLSVSYYDRFLSVNSVTKIQVVKMEADILKSLKFELGSPTVKTFLRQEVLRSIFFFYYYYYYYYYYYYYYYYYYYYYVNANAKYLNLIEVTMD. 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01396 159 Gene3D - 104 113 - -
Seca4g01396 159 Gene3D - 77 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01396 Seca-Chr4 22593256 22596442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01396 52 113 Core Cell Cycle Gene Families AT1G47230 39.130 2.23e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01396 K06627 - gmx:547779 66.2402