Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01385 ATGGCAGAACGAAAGGTTTTCACCCTCTCACAGGTTGCCCAACACAAATCCAACAAAAACTGTTGGGTGGTGATCAATGGCAGAGTGTTGGATGTGACAAAGTTCTTGGAGGAACACCCAGGAGGGGAAGAGGTGATCCTAGAGGTGGCTGGGAAGGATGCAACTAAGGAGTTTGAAGCTGTTGGACACAGCAAGGAAGCTCAAAACTTGGTTCTAAAATACCAAGTGGGTGTCCTTCAAGGTGCCACAGTTCAAGAGATAGACTACAAGGATGTTATGGACAAGGAACCTAAGAGCAAAGAGATGAGTGCCTATGTTATCAAAGATGATGCCGTGCCCAAATCTGTCACAATTTTCGAGTTCTTTGTTCCACTTCTTCTTGCCACTCTCTATTTTAGTTACCGATGCCTCACCAGAGCAGACCCTGTTACTTACTAG 438 0.4566 MAERKVFTLSQVAQHKSNKNCWVVINGRVLDVTKFLEEHPGGEEVILEVAGKDATKEFEAVGHSKEAQNLVLKYQVGVLQGATVQEIDYKDVMDKEPKSKEMSAYVIKDDAVPKSVTIFEFFVPLLLATLYFSYRCLTRADPVTY. 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01385 145 Pfam Cytochrome b5-like Heme/Steroid binding domain 8 79 IPR001199 -
Seca4g01385 145 SMART Cyt_b5_2 7 80 IPR001199 -
Seca4g01385 145 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 4 80 IPR001199 -
Seca4g01385 145 PANTHER CYTOCHROME B5 3 137 - -
Seca4g01385 145 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Seca4g01385 145 PRINTS Cytochrome B5 signature 29 39 IPR001199 -
Seca4g01385 145 PRINTS Cytochrome B5 signature 54 61 IPR001199 -
Seca4g01385 145 PRINTS Cytochrome B5 signature 39 53 IPR001199 -
Seca4g01385 145 FunFam Cytochrome b5 type B 1 84 - -
Seca4g01385 145 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 35 42 IPR018506 GO:0020037
Seca4g01385 145 Gene3D - 1 85 IPR036400 -
Seca4g01385 145 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 3 84 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01385 Seca-Chr4 22328865 22329848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01385 2 139 NADPH P450 reductases AT5G48810 44.928 3.71e-36 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01385 - - gmx:113001935 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01385 4 22328865 22329848 Seca4g01385 4 22328865 22329848 ECH