Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01382 ATGCCGGCAAGTTTCAATGATCATCTCCAGTGGTATGATTCCTCACTGAAATCAGTATCAGACTCTGCAGAGATGCTGTATACATACAAACATGTAGCTCACGGCTTCTCCACAAGACTAACTACACAAGAAGCAGAGTTACTTGCAAAACAACCGGGAATTCTCTCTGTTGTCCCTGAAGTTAGATACGAGCTTCATACAACTCGAACACCAGAGTTCCTTGGATTGGAAAAAACCAGCACCTTTTCACTCGCCTCTGGAAAACAGAGCGACGTGATAGTTGGAGTGCTTGACACTGGAGTTTGGCCTGAACTCAAAAGCTTCGATGACACGGGACTTGGGCCAGTACCCAGTAGCTGGAAAGGTGGGTGTGAAAGAGGTAAAAATTTTAACTCATCAAATTGTAACAGGAAACTTGTGGGGTATGAGGCCGCTTATGGACCCATCGATGAAAAGACAGAATCAAAGTCACCAAGGGATGATGACGGGCATGGAAGTCACACCTCAACTACAGCAGCAGGATCTGCAGTTACAGGAGCTAGCCTCTTTGGTTATGCTTCTGGGACAGCAAGAGGCATGGCCACACAAGCCCGAGTGGCAACTTACAAAGTGTGTTGGATTGGTGGATGCTTTACATCAGACATCGCTGCTGGAATTGACAAGGCCATTGAAGATGGTGTCCACATCCTTTCCATGTCTATTGGGGGAGGTTTAATGGACTACTACAGAGACACTGTTGCAATTGGAACTTTTGCAGCCACAGCTCATGGAATACTAGTATCCAATTCAGCAGGAAATGGTGGGCCTAGTCAAGCAACTTTGTCTAATGTGGCGCCGTGGGTAACCACTGTTGGTGCTGGAACTATAGACCGTGATTTCCCTGCCTATATCACCCTTGGAAATGGTAAGAGATACACTGGTGTATCTCTTTACAATGGCAAACTGCCATCTGGTTCTCCGCTGCCACTTGTCTATGCTGGTAGTTTGAATCCTGGAAAAGTTTCAGGAAAAATTGTGATATGTGATAGGGGAGGAACCCCTAGGGTGGAAAAGGGTGTGGTGGTCAAGAAGGCTGGAGGCATTGGGATGATTTTAGCCAACAATGAAGAGTACGGGGAAGAGCTAGTTGCTGACTCCTATCTCCTCCCTGCAACAGCTTTGGGCCAGAAATCCAGCAATGAAGTAAAGAAGTATGTTTTTTCTGCTCCCAACCCCACAGCTAAAATTGCATTTGGTGGTACCCAGTTAGGAGTTCAACCGTCCCCAGTGGTGGCAGCTTTCAGCTCCAGAGGACCAAATATGCTCACACCAAAGATACTCAAACCAGACCTGATAGCTCCAGGAGTCAACATTCTAGCTGGGTGGACTGGCGCAGTTGGACCAACCGCTGGCACATCCATGTCATGCCCCCATGTTAGTGGGTTAGCTGCCCTCCTTAAGGGAGCTCATCCTGAATGGAGCCCTGCAGCTATAAGGTCTGCCCTCATGACCACAGCCTATAGAACTTACAAAAATGGGCAAACCATAAAAGATATTGCCACTGGGCTACCAGCTACACCGTTTGATTATGGTGCTGGGCACGTGGATCCTGTAGCTGCTCTTGATCCTGGTCTTGTGTATGATGCTACCGTGGATGACTACTTGAGCTTCTTCTGTGCCTTGAACTACACTTCATTTCAAATAAAGCTTGCCACAAGAAGAGATTTTACCTGCGACAAAAGGAAGAAGTACAGAGTAGAAGATCTCAACTACCCATCTTTTGCTGTTCCTTTTGACACGGCTGCAGGCACTGTCCAGTATAAAAGGATTTTAACTAACGTAGGCACCCCAGCAACATATAAAGTTTCAGTGTCATCACAGTCTCCCTCAGTGAAGGTTGTGGTTGAACCACAAACACTTAGTTTCAGGGAACTGAACGAAAAGAAGAGCTACACGGTTACATTCACGGCTTCTTCAAAGCCTTCTGGCACAACCAGCTTCGCTCATCTGGAATGGTCAGATGGGAAACATAAGGTCACTAGTTCCATTGCTTTCAGCTGGACTTGA 2046 0.4687 MPASFNDHLQWYDSSLKSVSDSAEMLYTYKHVAHGFSTRLTTQEAELLAKQPGILSVVPEVRYELHTTRTPEFLGLEKTSTFSLASGKQSDVIVGVLDTGVWPELKSFDDTGLGPVPSSWKGGCERGKNFNSSNCNRKLVGYEAAYGPIDEKTESKSPRDDDGHGSHTSTTAAGSAVTGASLFGYASGTARGMATQARVATYKVCWIGGCFTSDIAAGIDKAIEDGVHILSMSIGGGLMDYYRDTVAIGTFAATAHGILVSNSAGNGGPSQATLSNVAPWVTTVGAGTIDRDFPAYITLGNGKRYTGVSLYNGKLPSGSPLPLVYAGSLNPGKVSGKIVICDRGGTPRVEKGVVVKKAGGIGMILANNEEYGEELVADSYLLPATALGQKSSNEVKKYVFSAPNPTAKIAFGGTQLGVQPSPVVAAFSSRGPNMLTPKILKPDLIAPGVNILAGWTGAVGPTAGTSMSCPHVSGLAALLKGAHPEWSPAAIRSALMTTAYRTYKNGQTIKDIATGLPATPFDYGAGHVDPVAALDPGLVYDATVDDYLSFFCALNYTSFQIKLATRRDFTCDKRKKYRVEDLNYPSFAVPFDTAAGTVQYKRILTNVGTPATYKVSVSSQSPSVKVVVEPQTLSFRELNEKKSYTVTFTASSKPSGTTSFAHLEWSDGKHKVTSSIAFSWT. 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01382 681 Gene3D Peptidase S8/S53 domain 91 547 IPR036852 GO:0004252|GO:0006508
Seca4g01382 681 MobiDBLite consensus disorder prediction 150 166 - -
Seca4g01382 681 Gene3D - 290 417 - -
Seca4g01382 681 MobiDBLite consensus disorder prediction 150 172 - -
Seca4g01382 681 Gene3D - 551 680 - -
Seca4g01382 681 SUPERFAMILY PA domain 321 370 IPR046450 -
Seca4g01382 681 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 677 IPR045051 -
Seca4g01382 681 CDD PA_subtilisin_like 296 409 - -
Seca4g01382 681 SUPERFAMILY Subtilisin-like 65 538 IPR036852 GO:0004252|GO:0006508
Seca4g01382 681 Pfam PA domain 322 391 IPR003137 -
Seca4g01382 681 PRINTS Subtilisin serine protease family (S8) signature 160 173 IPR015500 -
Seca4g01382 681 PRINTS Subtilisin serine protease family (S8) signature 89 108 IPR015500 -
Seca4g01382 681 PRINTS Subtilisin serine protease family (S8) signature 463 479 IPR015500 -
Seca4g01382 681 CDD Peptidases_S8_3 63 500 IPR034197 -
Seca4g01382 681 Pfam Peptidase inhibitor I9 4 66 IPR010259 -
Seca4g01382 681 FunFam Subtilisin-like protease SBT1.5 91 299 - -
Seca4g01382 681 Pfam Fibronectin type-III domain 581 677 IPR041469 -
Seca4g01382 681 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 66 IPR037045 -
Seca4g01382 681 FunFam subtilisin-like protease SBT1.5 290 416 - -
Seca4g01382 681 ProSiteProfiles Serine proteases, subtilase domain profile. 62 534 - -
Seca4g01382 681 Pfam Subtilase family 90 508 IPR000209 GO:0006508|GO:0008236
Seca4g01382 681 FunFam Subtilisin-like protease SBT1.5 551 681 - -
Seca4g01382 681 ProSitePatterns Serine proteases, subtilase family, serine active site. 464 474 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01382 Seca-Chr4 22312526 22314703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01382 1 681 Subtilisin-like Serine Gene Family AT5G67360 64.624 0.0 933
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01382 - - gmx:100794284 1169.45