Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01367 ATGGATGATCTTTCGTCCAACCTTCTCTGCCAAGAAAACAAAACGTTCTTGACAGAGGAATTGGGAATCTTTCAATCAAAGCAAGATTGTGGTGTTTCAGAGGATGAGCATGTGGGTGTTTTGATTGAGAAAGAGATGAGTCTTGGGTTCAAAAAGGATGAAACTTTGGTGTTTGGGGAGTGGCTCAAACGTGCCCGTTTGGATGCAATCAATTGGATTCTCAAAAAAAGAGCAACATTGGGTTTTCGCTTTCAAACTGCTTATTTGTCTGTCACATACTTTGATCGATTCCTTTCAAGGCGTTCCATTGATGGTGAAAAGTATTGGGCAATTCGGTTACTATCAATTGCATGTTTTTCTCTGGCTGCAAAGATGGAGGAGTGCAATGTGCCAGGGCTATCAGAGTTTCAATTGAAAGATTATTCCTTTGAGGGAAAAGTCATACAAAAAATGGAACTTTTTGTGCTGAGTGCCTTGGAATGGAATATGGGTATTATCACTCCCTTTGCTTTTCTTTCTTATTTCATCACAAAGTTCTGCAACGAATCCCCACAAAGTGATATTTTTTCCAAGACCATACAAATCATCCTTACCACAATGAAAGGTAGATCAATTTAA 618 0.39 MDDLSSNLLCQENKTFLTEELGIFQSKQDCGVSEDEHVGVLIEKEMSLGFKKDETLVFGEWLKRARLDAINWILKKRATLGFRFQTAYLSVTYFDRFLSRRSIDGEKYWAIRLLSIACFSLAAKMEECNVPGLSEFQLKDYSFEGKVIQKMELFVLSALEWNMGIITPFAFLSYFITKFCNESPQSDIFSKTIQIILTTMKGRSI. 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01367 205 FunFam Cyclin-D5-1 61 164 - -
Seca4g01367 205 ProSitePatterns Cyclins signature. 66 97 IPR006671 -
Seca4g01367 205 Gene3D - 63 164 - -
Seca4g01367 205 SMART cyclin_7 71 157 IPR013763 -
Seca4g01367 205 Pfam Cyclin, N-terminal domain 64 163 IPR006671 -
Seca4g01367 205 Gene3D - 165 198 - -
Seca4g01367 205 PANTHER CYCLINS 62 180 IPR039361 -
Seca4g01367 205 CDD CYCLIN_AtCycD-like_rpt1 65 161 - -
Seca4g01367 205 SUPERFAMILY Cyclin-like 27 163 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01367 Seca-Chr4 22081239 22083868 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01367 9 183 Core Cell Cycle Gene Families AT4G37630 42.162 1.25e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01367 K18811 - gmx:100798728 315.464