Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01303 ATGAAAGGGTTTGTGCCTACTGTTTTCCTAACATGCAGTGGACTCCAAGGTTGTAATTTCAAGCCTTTCAAGCCTAATAGTGTAAATTTAGGAATGAAAGGCTTGAAATTACTATTCTTTTTTGTTACTCCAAAGGGTGTCTTGAACCTATTGAAAGTTGAAGGCCTTACCATTTATCATGTGAAGAGGCACCTACAGAAGTATAGAACTTCCAGATACAAAACTGAATCATCAGAAGGTATGTGTAAGTCTATATAG 258 0.3643 MKGFVPTVFLTCSGLQGCNFKPFKPNSVNLGMKGLKLLFFFVTPKGVLNLLKVEGLTIYHVKRHLQKYRTSRYKTESSEGMCKSI. 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01303 85 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Seca4g01303 85 Gene3D - 5 74 - -
Seca4g01303 85 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 43 78 IPR046955 GO:0003700
Seca4g01303 85 NCBIfam myb-like DNA-binding domain, SHAQKYF class 42 71 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01303 Seca-Chr4 20592159 20592574 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01303 43 79 G2-like Transcription Factor Family AT4G28610 78.378 1.53e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01303 - - pavi:110761625 77.7962