Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01236 ATGATGTTCATGGATTTGGAATGGGTGTTTCCAATTCCAGATGTCCCTTATGCTTCAACAATGTTCACCATGCTGGCGTTAATAGGAGGGTTGTTGGTCTATTTGTATGGGCCCTATTGGGGAGTGAGGAAGGTTCCAGGCCCACCATCTCTGCCTCTGGTAGGACACCTTCCTTTGTTGGCTAAGTATGGCCCTGATGTGTTCTCAGTCCTCGCCAAGCAATATGGCCCAATCTACAGATTTCATATGGGAAGACAGCCACTAATAATTATAGCAGATGCAGAGCTTTGTAAAGAGGTTGGAATAAAAAAATTTAAAGACATTTCAAACAGAAGTATTCCTTCGCCCATCTCTGCATCCCCTCTTCACCAAAAGGGCCTTTTCTTCACCCGGGATTCTCAATGGTCTACCATGAGAAACACAATATTATCTGTCTACCAGCCATCACACTTGTCCAGATTAGTGCCAACAATGCAGTCATTCATAGAATCTGCCACCCAAAATCTTGATTCTCACAAACAAGACCTTGTCTTTTCTAGTCTTTCTCTCAGACTTGCAACTGATGTGATTGGACAAGCTGCATTTGGTGTCAACTTTGGCCTCTCTAAGCCTCAATCAATTTGTGATGAAATCAATAGTGTTGTTAACAACCAAGTTGGGGATGCTAGTGCTAGCAATGAAGTATCTGATTTCATTAACCAACACATTTACTCTACAACCCAACTTAAGATGGATTTGTCTGGTTCCTTCTCCATCATTCTTGGTCTACTTGTCCCAATACTCCAGGAACCATTTAGGCAGATTTTGAAGAGAATACCAGGTACCATGGACTGGAAAATTGAGCGTACTAACCAGAAACTAAGTGGCCGTCTTGATGAGATTGTAGAAAAGAGAATGAAAGATAAGATCAGAACTTCCAAGGATTTCTTGTCACTCATACTAAATGCTAGAGAATCAAAAGCTGTATCAGAAAATGTGTTCACACATGACTATATCAGTGCTGTTACTTATGAGCACCTACTTGCTGGTTCAGCTACCACATCCTTTACCTTATCTTCCATTATCTATTTGGTTGCTGCACATCCAGAAGTTGAGAAAAAACTGCTTCAAGAGATTGATGGGTTTGGTCCAATAGATCAGATACCTACTTCTCAAGATCTTCATGACAAGTTCCCTTATCTTGATCAGGTGATCAAAGAGGCCATGAGGTTTTACACTGTCTCCCCATTAGTTGCAAGAGAAACATCAAATGAAGTAGAGATTGGAGGTTACCTTCTTCCAAAGGGAACTTGGGTCTGGTTAGCCCTTGGAGTTCTAGCAAAGGATCCTAGAAACTTTCCAGAACCAGAAAAGTTCAAACCAGAGAGGTTTGAGCCTAACTGTGAGGAAATGAAACGAAGGCATCCTTATGCTTTTATACCATTTGGAATTGGTCCTCGAGCCTGCATTGGTCAGAAATTTTCCCTACAAGAGATCAAGCTTTCTCTGATTCATTTATACAGGAAATATTTGTTTAGGCATTCACCTAACATGGAAAACCCTTTAGAACTCGAATATGGCATAGTCCTCAACTTCAAGCAAGGTGTCAAGCTCAGAGTCATAAAAAGAACAGATAGGAGCTGCTGA 1626 0.4121 MMFMDLEWVFPIPDVPYASTMFTMLALIGGLLVYLYGPYWGVRKVPGPPSLPLVGHLPLLAKYGPDVFSVLAKQYGPIYRFHMGRQPLIIIADAELCKEVGIKKFKDISNRSIPSPISASPLHQKGLFFTRDSQWSTMRNTILSVYQPSHLSRLVPTMQSFIESATQNLDSHKQDLVFSSLSLRLATDVIGQAAFGVNFGLSKPQSICDEINSVVNNQVGDASASNEVSDFINQHIYSTTQLKMDLSGSFSIILGLLVPILQEPFRQILKRIPGTMDWKIERTNQKLSGRLDEIVEKRMKDKIRTSKDFLSLILNARESKAVSENVFTHDYISAVTYEHLLAGSATTSFTLSSIIYLVAAHPEVEKKLLQEIDGFGPIDQIPTSQDLHDKFPYLDQVIKEAMRFYTVSPLVARETSNEVEIGGYLLPKGTWVWLALGVLAKDPRNFPEPEKFKPERFEPNCEEMKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIHLYRKYLFRHSPNMENPLELEYGIVLNFKQGVKLRVIKRTDRSC. 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01236 541 SUPERFAMILY Cytochrome P450 39 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01236 541 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 475 484 IPR017972 GO:0005506|GO:0016705
Seca4g01236 541 Gene3D Cytochrome P450 35 540 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01236 541 PANTHER THROMBOXANE-A SYNTHASE 19 537 - -
Seca4g01236 541 Pfam Cytochrome P450 46 523 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01236 541 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01236 541 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01236 541 PRINTS E-class P450 group I signature 435 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01236 541 PRINTS E-class P450 group I signature 395 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01236 541 PRINTS E-class P450 group I signature 472 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01236 541 PRINTS E-class P450 group I signature 351 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01236 541 PRINTS E-class P450 group I signature 482 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01236 541 PRINTS E-class P450 group I signature 331 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01236 541 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01236 541 PRINTS P450 superfamily signature 482 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01236 541 PRINTS P450 superfamily signature 473 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g01236 541 PRINTS P450 superfamily signature 342 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01236 Seca-Chr4 19545688 19555833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01236 83 536 Cytochrome P450 AT2G26170 75.110 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01236 K20771 - gmx:100797803 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01236 4 19545688 19555833 Seca4g01236 4 19545688 19555833 ECH
Seca4g01236 4 19545688 19555833 Seca4g01236 4 19545688 19555833 PCT