Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca4g01223 | CGAAAACGAACGGTGCAGGCTAATGACAAATGGAAGGGTTACCTGTGTCCGTTTGTGTCGTCAATATGTCTTTCATCTTCACAGGAGCAACCTTCTGTTTTCCTTTCCTCCTTCCTCTACCCACCTTGTGTAGAACAAACTGCATCTGCCACCGGGAACCGGTGGAACCGGTGGCCGCAGTGTCCAAACGTTAACAAACATCAATGTATCATGTCTGTCCAGCAACCATGTGGTGGTGCCCCACCACAAAATATCACAATGGTCGCTGTGGACAGAGACAAGAACAGTGCTTATGCCTTCCGATGGGCCGTTAATCATCTTGATAATCCTTTCATCATCGCCGTCCATGTCAAGCACAAAAACTATCATAATCAGGGCACAAATGTTTTTCCACCGGACGAAGAAGACGTAGCCCAAATTTTCAGTCCCTTACGCCTAATGTGTAATCGTAAAGTTGTCACGATGAGAGAAGCTGTAGTTGATGATCATGATGTTGTCAAAGGAATTTTAGATTTTGCAAGCAAGAATCCCATACATAGCATTGTCATCGGTGCATCGAACAAGAACCCTTTGACAAGTCTAAAAAAATTTAAAGGCTATCATGATATACCAACAGCAGTGATCAAATCAGCCCCGGAATATTGCTCTGTATACATAATTTCGAAATTGAAGATTGTGTCAGCTCGATCAGCAATTCGATCAATGGCAAAACAGCTAGTCCCCCCAAAACAGCATCAACCTGTTCAGGCATTCCCACCTAGTGAATCAGAAAGTGGTGGAGGATCAGTAAGGGGATATCCACCTAGAAGTGGGGGTACTACAGAGGAAGGATCAGAATCAAGGTCTTTTGACAGCATTTATCCAGTAAGAACACAGGGACAGGGACAGGGACGGGAGAGGCCAAGGAGTGCGGGAAGTAACCAGTCATTGGACAACATTAATCTACCTGGTCGTGCACGACATTGGTCAATGGATGAGCGGGAGATTTTAGGACTTGTGCCTATTGATGTAACTAAACAAGATATGGATGTAATTGTTACATCTGATACCCACGGGACATCAACTTCAAGAGACCTTGAAGCTGAGATGAAAAGATTGAGGCTTGAACTGAAGCAAACTATGGACATGTACAGCTCAGCTTGCAAGCAAGCAATCTCAGCCAAAAATCAGGCTGAACAGATTCGTCGATGGAAAGTGGAAGAGGAACGTAAGGTTGAGGAAGTTAGGATGTCTCAAGAGGCAGCTCTTGCAATTGCAGAAAAGGAGAAGGCAAAAGCCAGAGCTGCATTGGAAGCAGCTGAGGAATCCAGGAGGAAGGCTGAACAGGAAGCACAGAGAAGAAAGGAGGCAGAGATGAAAGCCAGAAGAGAGTCAGAAGAGAAGGATCGAGTATTAACTGCTTTGGCTCAAAATGATTATCGATATAGAAAATACACCATAGAGGAGATTGAAGCAGCTACTGAAAAGTTCTCCCCATCAAAGAAAGTAGGTGAAGGTGGATATGGACCTGTGTACAAAGGCCAACTTGATCACACCCTAGTTGCAATCAAAATTTTAAATCCTGAGGCTTCTCAGGGCAGGAAGCAGTTCCAACAAGAGGTTGAGGTACTAAGCTGCATTAGACATCCGAATATGGTGCTCCTCCTTGGAGCCTGTCCTGAGCATGGATGCTTGGTGTATGAATATATGGATAATGGAAGCTTAGAAGATAGATTATTTCGGAAAAATAACAGCAGGCCTATTTCATGGAGGAAACGGTTCCAAATAGCTGCTGAGATTGCAACTGCACTCCTTTTCCTTCACCAAACAAAGCCAGAACCCATTGTGCACCGAGACCTTAAACCAGCTAACATTCTGTTGGACAGGAACCACGTGAGTAAAATCAGCGATGTTGGTCTGGCAAGACTAGTTCCCCCTTCTGTAGCTGATACTGTCACACAATATTACATGACTTCAGCTGCTGGAACCTTTTGTTATATTGATCCTGAGTATCAACAAACAGGAATATTAACACCAAAATCAGATATATATTCGTTGGGGATAATGCTTCTGCAGATAGTCACAGCCAAGCCTCCCATGGGTCTTGCTCACCAAGTCAGGAAGGCCGTTGAAAAGGGCAGGCTTTCAGAGATTCTTGACCCTGTGGTGACTGATTGGCCAGTTGAAGAAGCTCTATCTTTTGCCAAATTAGCAGTGAGCTGTTCAGAACTCAGCAAGAAGGACAGGCCAGATCTTGCAACAGTTGTATTACCAGAGCTTAGTCGGTTAAGAGACTTGGGATGCTCTTTACCCATCAATGAAGTTACCTCGCGCCCTCCCACACCTACCTGA | 2331 | 0.4474 | RKRTVQANDKWKGYLCPFVSSICLSSSQEQPSVFLSSFLYPPCVEQTASATGNRWNRWPQCPNVNKHQCIMSVQQPCGGAPPQNITMVAVDRDKNSAYAFRWAVNHLDNPFIIAVHVKHKNYHNQGTNVFPPDEEDVAQIFSPLRLMCNRKVVTMREAVVDDHDVVKGILDFASKNPIHSIVIGASNKNPLTSLKKFKGYHDIPTAVIKSAPEYCSVYIISKLKIVSARSAIRSMAKQLVPPKQHQPVQAFPPSESESGGGSVRGYPPRSGGTTEEGSESRSFDSIYPVRTQGQGQGRERPRSAGSNQSLDNINLPGRARHWSMDEREILGLVPIDVTKQDMDVIVTSDTHGTSTSRDLEAEMKRLRLELKQTMDMYSSACKQAISAKNQAEQIRRWKVEEERKVEEVRMSQEAALAIAEKEKAKARAALEAAEESRRKAEQEAQRRKEAEMKARRESEEKDRVLTALAQNDYRYRKYTIEEIEAATEKFSPSKKVGEGGYGPVYKGQLDHTLVAIKILNPEASQGRKQFQQEVEVLSCIRHPNMVLLLGACPEHGCLVYEYMDNGSLEDRLFRKNNSRPISWRKRFQIAAEIATALLFLHQTKPEPIVHRDLKPANILLDRNHVSKISDVGLARLVPPSVADTVTQYYMTSAAGTFCYIDPEYQQTGILTPKSDIYSLGIMLLQIVTAKPPMGLAHQVRKAVEKGRLSEILDPVVTDWPVEEALSFAKLAVSCSELSKKDRPDLATVVLPELSRLRDLGCSLPINEVTSRPPTPT. | 777 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca4g01223 | 776 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 87 | 194 | - | - | |
Seca4g01223 | 776 | SMART | serkin_6 | 490 | 754 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca4g01223 | 776 | Gene3D | Phosphorylase Kinase; domain 1 | 460 | 562 | - | - | |
Seca4g01223 | 776 | MobiDBLite | consensus disorder prediction | 433 | 458 | - | - | |
Seca4g01223 | 776 | PANTHER | OS02G0152300 PROTEIN | 86 | 772 | - | - | |
Seca4g01223 | 776 | FunFam | U-box domain-containing protein 51 | 563 | 762 | - | - | |
Seca4g01223 | 776 | SUPERFAMILY | Protein kinase-like (PK-like) | 473 | 749 | IPR011009 | - | |
Seca4g01223 | 776 | Gene3D | Transferase(Phosphotransferase) domain 1 | 563 | 759 | - | - | |
Seca4g01223 | 776 | Pfam | Universal stress protein family | 87 | 192 | IPR006016 | - | |
Seca4g01223 | 776 | Coils | Coil | 409 | 461 | - | - | |
Seca4g01223 | 776 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 463 | 562 | - | - | |
Seca4g01223 | 776 | Pfam | Protein kinase domain | 492 | 746 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca4g01223 | 776 | Gene3D | HUPs | 80 | 216 | IPR014729 | - | |
Seca4g01223 | 776 | ProSiteProfiles | Protein kinase domain profile. | 490 | 753 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca4g01223 | 776 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 608 | 620 | IPR008271 | GO:0004672|GO:0006468 | |
Seca4g01223 | 776 | MobiDBLite | consensus disorder prediction | 273 | 314 | - | - | |
Seca4g01223 | 776 | MobiDBLite | consensus disorder prediction | 238 | 319 | - | - | |
Seca4g01223 | 776 | CDD | STKc_IRAK | 496 | 749 | - | - | |
Seca4g01223 | 776 | CDD | STK_N | 88 | 222 | - | - | |
Seca4g01223 | 776 | Coils | Coil | 356 | 376 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca4g01223 | Seca-Chr4 | 19402313 | 19407030 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca4g01223 | 155 | 760 | Receptor kinase-like Gene Family | AT5G12000 | 59.135 | 0.0 | 716 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-IXb | Seca4g01223 | Pkinase | 3e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca4g01223 | - | - | gmx:100798861 | 946.421 |