Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01165 ATGATGCACATGACCTTTTACTGGAGCAATAAGGTCACTCTCCTCATCGATTCATGGAAGACTCATTCATGGATAGGTTATATCCTCACTTTAATTGCATGTCTCATCGTCGCTCTTTTCTACCAATTTCTCGAGAATCGCCGGATTCGCCTCAAGCTGTTCGCCGCCGGGAGGAATTTTCCGCAGGAGATCCAGACTCCTCTTCTGCGACGGAAACTCGTCGGAAACAGAGCTAAGGCCGGTGTTAAGGTCGCCGGAGCGCTTCTCTTTGGTCTGAGCTCCGCGATCGGGTATCTGTTGATGTTAGCCGTTATGTCCTTCAACGGTGGGGTCTTTATTGCCATTGTCGTTGGTCTCGCCATTGGTTACTTCTTCTTTAGGAGCGATGGTGAAGATTCCGTTGTCGTTGACAGTTCTTGCGCCTGTGCTTAA 432 0.4931 MMHMTFYWSNKVTLLIDSWKTHSWIGYILTLIACLIVALFYQFLENRRIRLKLFAAGRNFPQEIQTPLLRRKLVGNRAKAGVKVAGALLFGLSSAIGYLLMLAVMSFNGGVFIAIVVGLAIGYFFFRSDGEDSVVVDSSCACA. 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01165 143 Pfam Ctr copper transporter family 4 126 IPR007274 GO:0005375|GO:0016020|GO:0035434
Seca4g01165 143 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 133 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01165 Seca-Chr4 18631296 18631727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01165 1 143 Inorganic Solute Cotransporters AT5G20650 55.333 5.04e-52 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01165 K14686 - gmx:100815028 237.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01165 4 18631296 18631727 Seca4g11652 4 256372752 256373234 ECH
Seca4g01165 4 18631296 18631727 Seca4g01165 4 18631296 18631727 ECH