Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01157 ATGAAAGGTGAAAATGTGCATCTAGAATCATCAAAAGATTCAGGAGTAATGAGCATTAGGAGCAAGGAATTGGTTGATATATTTCTAGATGCGCCTCGTGAATTTTATTTCCTTCGCTATTGTCAACAAGTTGACACTGGGGTGTGGGTGATAACAGATATATCTTATGACTCTTTTCGAGTTAGCTCCTCCCCTCTTTATCGTTCTTGGAGATACCCTTCTGGATGCATGATTCGTGAAATCTCTAATGGGTGTTGCAAGCTCACATGGGTTGAGCATGTGGAAGTGGATGATGAGAATCATACCCACCAACTATATAGAGATCTTGTTGGCGTCAATATTGATTATGGAGCAAGAAGATGGATATTGGGACTTCAAAGAATGTGTGGGAGATTTGCTTCCTTTCATGTTAAAAAGATACCTTATCAAGACTTTGGAGGAGGGAGGAAGGGTGTAATGAAGTTTTCTCATCAAATGGTTAAAACATTCTGTGAAAGTTTAACCATGTCAAGTCATGAGCCAGACTTCCCACATTTAACTGTGGGAAATAATAACGGGGTTAGGGTCAATGTTCGCAAAAGCATGGGCATAGGCCAACCAAATGGAATAGTTGTTATGGTTGCTACCTCCTTTTGGCTTCCTCTCCATTATGAGAAAGTTTTTGAGTTTCTCATAGATCACAAAAGACGAGCTCATGATGTTCTTGCAAGTGGAAATCCAATGCATTTGGTTGCACACATTTCAAATGGAATTCATCTTGGCAACTGCATTTCAATTATTCAGTCATTCATCCCTAGTGAGAACGACTTCGTGATTCTTCAAGAAAGCTTTACACACCCCATGGAATCGTATGTTGTATATGTTCAAACTAATTTAGCAGCAATGAATTTAGCTATAAGGAGTGAAGATTCTTCTATGTTATCAATTCTTCCATCAGGTTTTGTCGTCTCTCCAAATGGCCAACCAAAAGAAACTTTGGAAGCAATTATTAGTGAAAATGTTGATAGATCAAGAGGCTCGTTATTAACTGTGCTTTTCCAGGTATTGACTAAAAGTCCAGATGGGAGCAAACTTCTGAATATGGAATTTGTTACATCTCTCAACACTCTTTTAACCTCAACAGTTGAAAAAGTGAAGGAAGCTCTGAACTTTAATAGTGCGGAGTAG 1167 0.3865 MKGENVHLESSKDSGVMSIRSKELVDIFLDAPREFYFLRYCQQVDTGVWVITDISYDSFRVSSSPLYRSWRYPSGCMIREISNGCCKLTWVEHVEVDDENHTHQLYRDLVGVNIDYGARRWILGLQRMCGRFASFHVKKIPYQDFGGGRKGVMKFSHQMVKTFCESLTMSSHEPDFPHLTVGNNNGVRVNVRKSMGIGQPNGIVVMVATSFWLPLHYEKVFEFLIDHKRRAHDVLASGNPMHLVAHISNGIHLGNCISIIQSFIPSENDFVILQESFTHPMESYVVYVQTNLAAMNLAIRSEDSSMLSILPSGFVVSPNGQPKETLEAIISENVDRSRGSLLTVLFQVLTKSPDGSKLLNMEFVTSLNTLLTSTVEKVKEALNFNSAE. 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01157 388 ProSiteProfiles START domain profile. 1 134 IPR002913 GO:0008289
Seca4g01157 388 SUPERFAMILY Bet v1-like 29 132 - -
Seca4g01157 388 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 32 383 IPR042160 -
Seca4g01157 388 Gene3D - 18 99 IPR023393 -
Seca4g01157 388 Pfam START domain 31 129 IPR002913 GO:0008289
Seca4g01157 388 SUPERFAMILY Bet v1-like 159 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01157 Seca-Chr4 18527790 18530347 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01157 2 387 Homeobox Transcription Factor Family AT1G73360 36.569 2.06e-84 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01157 K09338 - gmx:100795075 448.358