Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01152 ATGGAAAATCGAAGTGGAGCCTTGCACTTGATGTATGAAAAATTGCATGATCTTTCACCTTTAGTGCGGCCTCGTGAATTTTATTTCCTCCGTTATTGTCAACAAGTTGACATTGGGGTGTGGGTGATAACAGATATGTCTTATGACTCTTTTCGAGTTAGCTCCTCCCCTCTTTATCGCTCTTGGAGATACCCTTCTGGATGCATGATTCATGAAATCTCTAATAGGTGTTGCAAGCTCACATGGATTGAACATGTGGAAGTTGATGATGAGATTCATGCCCACCAACTATATAGAGATATTGTTGGCGTTAACATTGCTTATGGAGCAAGAAGATGGGTATTGGAACTTCAAAGAATGTGTGGGAGATTTGCTTCCTTTCATGTTAAAAAGAAACCTTATCAAGACTTTGGAGGAGGTTATTATTACAATTTGACTTCTTTACTCCCAATGCTTATTCATTTATTTTCCTTCTGA 477 0.3857 MENRSGALHLMYEKLHDLSPLVRPREFYFLRYCQQVDIGVWVITDMSYDSFRVSSSPLYRSWRYPSGCMIHEISNRCCKLTWIEHVEVDDEIHAHQLYRDIVGVNIAYGARRWVLELQRMCGRFASFHVKKKPYQDFGGGYYYNLTSLLPMLIHLFSF. 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01152 158 ProSiteProfiles START domain profile. 1 126 IPR002913 GO:0008289
Seca4g01152 158 SUPERFAMILY Bet v1-like 6 124 - -
Seca4g01152 158 Pfam START domain 6 121 IPR002913 GO:0008289
Seca4g01152 158 Gene3D - 2 101 IPR023393 -
Seca4g01152 158 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 2 136 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01152 Seca-Chr4 18416030 18416789 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01152 6 139 Homeobox Transcription Factor Family AT1G73360 49.254 2.22e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g01152 K09338 - gmx:100795075 194.897