Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00994 ATGGTGATGAAGTCTACCATCCCTACTGTTATGGTTGGAGTTTTGAGTATTTATGGCCTTATCATTACTGTTATAATAAGTATTGGTATTAATCCCAAGGCCAAATCTTATTACCTATTTGATGGTTATGCCCATGTCTCATATGCTCCTGCCCGAAGGCTGGCTAACCTCTCTATTGCATGGCTATTGGTATTGTTGGTGATGCTGATGTTAGGCATAACTCTTCCGCCTTAG 234 0.406 MVMKSTIPTVMVGVLSIYGLIITVIISIGINPKAKSYYLFDGYAHVSYAPARRLANLSIAWLLVLLVMLMLGITLPP. 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00994 77 Gene3D - 1 72 IPR035921 -
Seca4g00994 77 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00994 Seca-Chr4 15994874 15995107 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00994 1 58 Primary Pumps ATPases(2) AT1G19910 74.138 8.57e-24 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00994 K02155 - han:110921124 67.781