Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00961 ATGGCCAAGTTTATGCACTCTGTTATTGAAGGAGAGGTGTATAGGGTGACGAACTTTGGGTTGAAGCGCAACTCAAGACATTTCAAAGCAAGTGCTCATGAGTTTATTGTGGTGTTCAATGCGAATACAAAAGTCATTCCTTGCCACAGAGTTGGAATACCATTGTCTGGCTTGTCCCTGGTGAAGACAATGGACATCAAGAAAACAAATGGCCGCTCAAATTTTCTTATAGATTTCATGGGGATTGTCAGTGAAATTTCGGAGGAAATTATGCTGAACAAGGAAGGGAGACAAACACGTCTCATGCTGTTGGATTTAGTGGATGAGATGGGGGACATACGCTTAGCTGTGTTTGGAGAAATAATTGATGTTGTTGCGAGATTCCTATCCCTTCCTCAAATAGGACTTCCTGTACTTATAGTTCATTTGGCAAAGGTTAATCTCTACAAAGGTGAAGTGGGCATTCAAAATGTGATGAATGCAACAAAGTTCTTCTGGAATCTCGACTTACCTGAGGCTATTGACTTCAAAAATGGATTAGCCATGCACGAGATCGAAACAGAACTTGATATTGGAAAGATATGTCAAAGAAACAAGCCTGTTTCACTTAAGGAAGAATTCTTCCAGCTCTATCCGAAGAAGACCCTACGTCAGTACAAACTCAAGTTGGAGGTTGGAGATGGAACAGATAGTGTGCAATTGATTCTGTTTGATTCTGAGTGCTACACCATCCTTAATAAGTCATGCCGTGACATGTTGTCCGAGCAGAAGGAAGATACATCATTTAGTTATGATCAATCCTTTAGAGTGAGGAGAATTTGTTCAGACCTTGATATCATTGCTCAGTATAAGGCTGAAATTGAATGCGAGACTCCACTCAAGATGAAGTTTAGCCCTTCATTCAACAAGATAGGGGCTGGAAACGGTAATCCATGTGTTATGGAAGTATCCCCCCACTGCCCCTCTGCTGGTCGTGACATAGAAGTCAGCCCAATTGCTTGTATGCAAAAGCCACCTATTGTGGATGATAGTGGAAGTGCTTGCAAAAGGGATAACGAGGAAGCAACTGATGGAGTTTCTATTCGCAAAAGACGTGGGAAAGGGCGACAAATGAAACTTGAGAGAAGTTGA 1131 0.4182 MAKFMHSVIEGEVYRVTNFGLKRNSRHFKASAHEFIVVFNANTKVIPCHRVGIPLSGLSLVKTMDIKKTNGRSNFLIDFMGIVSEISEEIMLNKEGRQTRLMLLDLVDEMGDIRLAVFGEIIDVVARFLSLPQIGLPVLIVHLAKVNLYKGEVGIQNVMNATKFFWNLDLPEAIDFKNGLAMHEIETELDIGKICQRNKPVSLKEEFFQLYPKKTLRQYKLKLEVGDGTDSVQLILFDSECYTILNKSCRDMLSEQKEDTSFSYDQSFRVRRICSDLDIIAQYKAEIECETPLKMKFSPSFNKIGAGNGNPCVMEVSPHCPSAGRDIEVSPIACMQKPPIVDDSGSACKRDNEEATDGVSIRKRRGKGRQMKLERS. 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00961 376 MobiDBLite consensus disorder prediction 344 364 - -
Seca4g00961 376 SUPERFAMILY Nucleic acid-binding proteins 60 181 IPR012340 -
Seca4g00961 376 Gene3D - 193 276 IPR012340 -
Seca4g00961 376 Gene3D - 52 188 IPR012340 -
Seca4g00961 376 Gene3D - 1 50 IPR012340 -
Seca4g00961 376 MobiDBLite consensus disorder prediction 342 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00961 Seca-Chr4 15511886 15514111 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00961 3 177 Core DNA Replication Machinery Family AT5G45400 23.889 1.00e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00961 - K07466 adu:107469618 154.451