Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00949 ATGTCAGCATCTCGAATTTTTTACACCATTAATGAATGCATCTCCTTGGTACAATCAGATTCCCATGAAGCTCAAGAGAAAGGTCTTCAAACGCTAGCTGCTATCACCAAGGTGAGTCCTCAAAACAGAACCTTGCTAGCTCAAACAGATGGAGCAATCCCAACACTTGCAACACTGACAAATGCTTCCTCTCCCATTATCCAAACACTTTCCTTGTTGATCCTCTTTAACCTTTCCCTAAATCCTGATCTAAAACAGTCTCTTGCTGATATGGAAACCATTTATTACCTAAATTCCCTAATTAGCTCATCAAGCTATTCTCTTGATTCCTGCAAACTTGCCTCCTCATTGATTTGCAGTTTGTCCATGCATGATAAAAACAAGGCCAAATTTGGGGTAGCAGGTACAGTTCAGTTGCTTGTGAAGGCTATTAAAGGCTCTGGTGACTCTGATGCTCATCACCTTATGAGTTCTTTGGCAGAGCTTGTGCTGTTCCATGGAAACTGCACTTTGGCAGTGAGAGCTGGAGCAGTTCCAGTGCTACTGCAAGTTGTAGAGAACACTGAAAATGAGGACTTGGCTGGAACATCTCTTACTGTTCTTGGTCTTCTTGCAAGGTTTGATGAAGGGCTAAGTGGTCTGAAGAAAACGAATCAGATAATTGGTTCAATGTTAAGTGTGTTGAGAGGGAGGTCTTTGTTGAGTAAAGAGGGTGCAGCTGATATCCTTATTCGCCTTTTTGATGATAGTGAAGAGTGTGTCAGAGAGGCTTTGATGTTACCAGAATTCTCAAGTGTGTTAGCTGATCTTTCTGTGAGGGGTTCGGCAAGAGTTAGAGATAAGGCTGATTTACTAATGAGGAAGATTGCAAAGGTGAGCAGCCTAGAAGCTAATATGGAACCAACCTCCCTAAGTTGA 918 0.4227 MSASRIFYTINECISLVQSDSHEAQEKGLQTLAAITKVSPQNRTLLAQTDGAIPTLATLTNASSPIIQTLSLLILFNLSLNPDLKQSLADMETIYYLNSLISSSSYSLDSCKLASSLICSLSMHDKNKAKFGVAGTVQLLVKAIKGSGDSDAHHLMSSLAELVLFHGNCTLAVRAGAVPVLLQVVENTENEDLAGTSLTVLGLLARFDEGLSGLKKTNQIIGSMLSVLRGRSLLSKEGAADILIRLFDDSEECVREALMLPEFSSVLADLSVRGSARVRDKADLLMRKIAKVSSLEANMEPTSLS. 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00949 305 Gene3D - 5 303 IPR011989 -
Seca4g00949 305 SUPERFAMILY ARM repeat 9 212 IPR016024 -
Seca4g00949 305 PANTHER U BOX DOMAIN-CONTAINING 15 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00949 Seca-Chr4 15359766 15361006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00949 15 282 U-box Gene Family AT1G23030 26.545 6.07e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00949 - - gmx:121174819 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00949 4 15359766 15361006 Seca4g00949 4 15359766 15361006 ECH