Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00946 ATGTGTGATGAAGAATTGAAACCCGTAATTGGCACGACCTTTGATACTTTAGAAGAAGGAGAAAACTTTTATAAAAGGTATGCACATGTTGTTGGTTTTAGTGTACGCAAATCATCTGAAATAAAAGATAAAAATGGTGTGAAGTGGAAGTATTTTCTTTGTTCAAAAAGAAAGTTAACAAGGGAAGGGTGTAATGCAAAGATTGTTTTCACGAGGACAATGGAAGAAAAAAATGAAGTTGTGCGGTTTCATGAAGTACATACAAATGCCTTAGCCACACCTAAAAAAACGCAATTCTTAAGGTCTACTAGGGAAGTAAGCAATGTTCACAAGAATTTATTACTTTGCTATAATAGAGTCAATGTAGGGCCTTCAAAAGTTTACCAATTAGTAAAAGAGCAGGTTGGGAGATATGGCAATATGGGATGCACAAAAAGATATCTCCAAAATTATTCTAGAGATTTGAAGTTTTGCATGTGGCACATTATGAAAAAGCTTTCAGAGAAGGTTGGTGTTTCTTTGAATTCCAACACTGCTTTTAATAGACATGCGAAGTATGTGGATACCAGCTTATTTCAGAGATATGTTTATGGCTGGAATATTGAGAACAACCTCAAGATCAGAGAATTTGAGTCTGCAATAGAATCGCAAATGCATGGAGAATTACTTGCAGACAATGATACACTTAAGGCTATGTCGCAATTAAAGTTATATAAGGATATAGAGAAGCATGGCAGGGAAGTCTACACTTATGAAATTTTTTACATATTTCAAAGTGAGTTATGGAGTGCATGTGTTGATTGTGGAGTCAAAGAAAAAAGAGATGAAAATGGGAAATCATTAATTTTTATACTTGATCATATTATGGTCAATGGCATGCCATGTCGACATATCCTTTTTGTGTTAAACAGTAAATGCTTGAATAAAATCCCAAACCATTACATTGTTAATATATGGACCAAGTTAGCAACTAGCAAACCAATTTTTTATTATGATGGAAATATATTGGAGGCATGTTCAGAATTACAAAGTGAGAGCCAATTAATTTCTGATGCTAGGGCACAATTGTTTAAATACATGCACATGGCTGGTACATGTAAAGAGAAACTACTCCTTGTCATAAAAGAAGCTTCTAATATTGAATTGAAATTAAGTCAGACAGAAGGTGATGTTGGACCAAGCAAGTTAGATGAATTAGAGTCTTTTATTAGCTCTAATGTGCCTAAGGATATTGAAATTCTTCCTCTCGAACCTTCAAATACCAAAGGATGTGGAAAACGAATTAAGGGGGAAAAGAGAAGGCAATGGAACAACAACAAAAGAGAACAAGACTTTGTAAGACTTGTAGACAATTTTCATATCATGATAGTCATAATTGCCCAACAAAGTCCTCTTAATTTTTGGTAA 1407 0.3404 MCDEELKPVIGTTFDTLEEGENFYKRYAHVVGFSVRKSSEIKDKNGVKWKYFLCSKRKLTREGCNAKIVFTRTMEEKNEVVRFHEVHTNALATPKKTQFLRSTREVSNVHKNLLLCYNRVNVGPSKVYQLVKEQVGRYGNMGCTKRYLQNYSRDLKFCMWHIMKKLSEKVGVSLNSNTAFNRHAKYVDTSLFQRYVYGWNIENNLKIREFESAIESQMHGELLADNDTLKAMSQLKLYKDIEKHGREVYTYEIFYIFQSELWSACVDCGVKEKRDENGKSLIFILDHIMVNGMPCRHILFVLNSKCLNKIPNHYIVNIWTKLATSKPIFYYDGNILEACSELQSESQLISDARAQLFKYMHMAGTCKEKLLLVIKEASNIELKLSQTEGDVGPSKLDELESFISSNVPKDIEILPLEPSNTKGCGKRIKGEKRRQWNNNKREQDFVRLVDNFHIMIVIIAQQSPLNFW. 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00946 468 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 232 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00946 Seca-Chr4 15348873 15351050 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g00946 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00946 - - mtr:120577464 277.715