Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00926 ATGGGAGCGCCTTTTAAGGGTATCATTCAAGATGTCAAAGGAAGAGCCCAATGCTATAGGCAAGATTGGATTTGTGCAATCTGTTCTGGCGTTAGTATATTGGCTCCAACTTTCTACATATTCTTTGCTTCTGCTCTCCCTGTTATTGCTTTTGGAGAGCAACTAAGTAGGGATACAGATGGAAGCTTGAGCACAGTGGAAACATTGGCATCTACTGCAATTTGTGGAATTATCCACTCAATATTTGGTGGCCAGCCTTTGTTGATTTTAGGAGTTGCAGAACCAACTGTTATAATGTACACTTATCTATACAGTTTCTGCAAGAAAACGCCACAACTGGGTGCCGAGCTCTTTCTGGCTTGGGCTGGTTGGGTCTGTGTTTGGACGGCACTCATGTTAATTCTACTTGCAATTTTTAATGCTTGCACGGTTATTACTAGGTTTACAAGAATTGCAGGGGAGTTATTTGGCATGCTAATTACTGTTCTTTTCTTTCAAGAGGCTATAAAGGGACTGATAGGCGAGTTCAACACACCCAAGAATGAAGATCCTTCATCAGAGGAATTTCAATTCCAATGGCTGTATACAAATGGATTACTAGCCATCATTTTTTCATTTGGAGTACTTTTCACTGCCCTTAAAAGCAGAAGAGCAAGATCATGGCGATATGGAACAGGGTGGCTACGGGGTTTTATTGCAGAGTATGGGGTTCCAATGATGGTAGTGACATGGACTGCAGCATCTTATATTATACCAGGCAAAGTTCCAGATGGTGTTCCTAGAAGGCTGGTTTGTCCACTTCCCTGGGAATCTGAGTCGCTCTATCACTGGACAGTAGTGAAGGATATGGGGAAGGTACCGGTGCTGTATATATTTGGGGCAATTATTCCAGCTCTGATGATAGCAGGTTTATACTTTTTCGATCACAGCGTAGCATCACAGATGGCTCAACAGAAGGAATTTAACCTTCAAAAGCCTTCTGCCTACCACTATGATGTTTTCTTGCTTGGAATAATGACTTTGATTTGCGGCATCCTTGGCCTTCCTCCTTCAAATGGAGTCCTTCCACAGTCTCCCATGCATACAAAGAGTTTGGCAGTTCTTAGGAGGCGGTATCAAACTCAATTCAGATCCTTGTATTGCATCATCAATTTGCAGTTGATCAAAAAGAGGGTGGTGAAAAGTGCCAAGGAATGTATTAAGCAACAAAGGACCAGCTCTGAATTATATGGAAAAATGCAAGCTGTGTTTATAGAAATGGATACAGCCCCTACCGTTAAGGAATTGGAGAATTTGAAGGAAGCTGTAATGAAATCTGATAGCAAGGATGGTGTAAAGGAAAATTTTGATCCTGAGAAACACATAGATGAATATCTGCCAGTCAGGGTTAATGAGCAAAGAATGACCAACTTATTGCAGTCCCTCCTGGTTGGCGTATCAATGTTAGGTATCTCTGTTATCAAAAAGATACCTACCTCAGTTTTATGGGGATATTTCGCCTACATGGCAATTGATAGTCTTCCAGGGAATCAGTTTTGGGAAAGGATATTGCTCCTTTTCATCACCCCAAGTCGGCGTTACAAAATTTTGGAAGGTTCTCATGCCTCATTTGTAGAGAAAGTACCATTCAAGACCATAGCTGCATTTACAGCCTTACAATTAGCATATTTTTTATTGTGTTTCGGGGTTACATGGATACCTATTGGTGGAATATTGTTTCCAGTACCATTCTTCCTTCTCATAATTATAAGAGAACGCTTGCTTCCAAAGCTATTCAAGCCTAGTTATCTTCAGGAACTAGATGCTTCTGAGTATGAGGAAATACTTGGTGCTCCACATGGTGCCCCTTCACTGAGGGATAAGGAGCAACGTGATAGTGATACCGATGGAAGCTCGGAAGATTACTATGATGCAGAGATATTAGATGAGATGACAACCAGCAGAGGAGAGTTGAAACTTAGAAATGTAAGCTTCAATGAAAGAAACAGCAACAGCTTCAGCGAAGACAGACACTTTCAGGTTTACCCTGAAGATAGTGTCTGA 2043 0.4146 MGAPFKGIIQDVKGRAQCYRQDWICAICSGVSILAPTFYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGIIHSIFGGQPLLILGVAEPTVIMYTYLYSFCKKTPQLGAELFLAWAGWVCVWTALMLILLAIFNACTVITRFTRIAGELFGMLITVLFFQEAIKGLIGEFNTPKNEDPSSEEFQFQWLYTNGLLAIIFSFGVLFTALKSRRARSWRYGTGWLRGFIAEYGVPMMVVTWTAASYIIPGKVPDGVPRRLVCPLPWESESLYHWTVVKDMGKVPVLYIFGAIIPALMIAGLYFFDHSVASQMAQQKEFNLQKPSAYHYDVFLLGIMTLICGILGLPPSNGVLPQSPMHTKSLAVLRRRYQTQFRSLYCIINLQLIKKRVVKSAKECIKQQRTSSELYGKMQAVFIEMDTAPTVKELENLKEAVMKSDSKDGVKENFDPEKHIDEYLPVRVNEQRMTNLLQSLLVGVSMLGISVIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFITPSRRYKILEGSHASFVEKVPFKTIAAFTALQLAYFLLCFGVTWIPIGGILFPVPFFLLIIIRERLLPKLFKPSYLQELDASEYEEILGAPHGAPSLRDKEQRDSDTDGSSEDYYDAEILDEMTTSRGELKLRNVSFNERNSNSFSEDRHFQVYPEDSV. 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00926 680 PANTHER ANION EXCHANGE PROTEIN 2 609 IPR003020 GO:0005452|GO:0006820|GO:0016020
Seca4g00926 680 Pfam HCO3- transporter family 197 372 IPR011531 GO:0006820|GO:0016020
Seca4g00926 680 Pfam HCO3- transporter family 4 178 IPR011531 GO:0006820|GO:0016020
Seca4g00926 680 Pfam HCO3- transporter family 461 551 IPR011531 GO:0006820|GO:0016020
Seca4g00926 680 Gene3D Helical hairpin bin 15 57 - -
Seca4g00926 680 MobiDBLite consensus disorder prediction 612 636 - -
Seca4g00926 680 MobiDBLite consensus disorder prediction 617 631 - -
Seca4g00926 680 MobiDBLite consensus disorder prediction 664 680 - -
Seca4g00926 680 MobiDBLite consensus disorder prediction 661 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00926 Seca-Chr4 15160661 15165958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00926 4 679 Antiporters AT4G32510 65.747 0.0 934
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00926 K24194 - gmx:100787412 1165.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00926 4 15160661 15165958 Seca4g00926 4 15160661 15165958 ECH
Seca4g00926 4 15160661 15165958 Seca4g00926 4 15160661 15165958 PCT