Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00899 ATGGAAGAAATTGAAGGATTGAATTGTTGTAGTGAAAGTAGGAGCTGCAGTGAGAGTCGACCACCCAATCCCAACCCATCTGCTGCTGCTGCATATCGCCAATGCCAACGCACTGACCCTGTGGTGATGCCATGCAAGATATCCCTTGTTCGCCACGCTTCTCTTCAGCCAAAAACGAAGTTGTCTGATGTATCTGCTGAGCCAGGGCATGCTGCTGAAGACTGTCAATCTGATTTCCTTCCAAAGCTTCGCTCTGGAGCATGTGGTGATATTGGGTTCAGGTCATGTATGGAAGATGTATATGTTTGTGCTGACAACTTTATGCAGGATTATGGGCTCAAGAACCATATAGATGGACCCAGTGCTTTCTATGGGGTATATCTTTACTCTTTTTACATGCTAATATTCTCTAGTAACAATATGTTGCTTTACCTATTGTATGGACCAATTCATGTAACATTATATGGCCAATGGTTTGGTCAGGTATTTGATGGGCATGGTGGAAAGCACGCTGCTGATTTTGCTTGCCATCATTTGCCAAAGTTCATTCTTGAGGATGAAGATTTCCCAGAAAATATTGAAAGGATAGTTGCTTCAGCATTTCTGCAAACAGACAAAGCCTTTGCAGAAGCTTGCTCTCTGGATGCTGCCCTTGCATCTGGCACCACTGCATTGGCTACTCTTGTTATTGGAAGGTTGCTGGTGGTGGCAAATGCCGGAGATTGTCGAGCTGTGCTGTGCCGTCGTGGAAAAGCAATTGAAATGTCAAGAGATCATAAACCAATTTGCAGTAAAGAAAAGAAGCGAATCGAGGCATCTGGGGGGTTTGTCTATGATGGATACCTCAATGGACAACTTAATGTTGCTCGTGCAATAGGTGACTGGCACATGGAAGGAATGAAAGGCGAAGATGGCGGACCACTCAGTGCAGAACCTGAACTTATGACTACAAAACTCACTGCTGAGGATGAATTTCTAATCATAGGTTGTGATGGAATTTGGGATGTATTTAGGAGCCAAAATGCAGTAGATTTTGCTCGGCGCAGGCTTCAGGAGCATAACGACCCAGCCATGTGTAGTAAAGATCTGGTTGATGAGGCATTAAAGAGAAAGAGTGGAGACAATTTAGCTGCTGTTGTGGTTTGCTTCCAGCAGCAGCCACCACCTAACTTGGTGGCACCGCGCTCTAGAGTGCACAGGAGCTTCTCTGCTGAAGGTTTGAAGGAGTTGCAAAGCTTCCTAGACAGCTTGGGTAATTGA 1260 0.4516 MEEIEGLNCCSESRSCSESRPPNPNPSAAAAYRQCQRTDPVVMPCKISLVRHASLQPKTKLSDVSAEPGHAAEDCQSDFLPKLRSGACGDIGFRSCMEDVYVCADNFMQDYGLKNHIDGPSAFYGVYLYSFYMLIFSSNNMLLYLLYGPIHVTLYGQWFGQVFDGHGGKHAADFACHHLPKFILEDEDFPENIERIVASAFLQTDKAFAEACSLDAALASGTTALATLVIGRLLVVANAGDCRAVLCRRGKAIEMSRDHKPICSKEKKRIEASGGFVYDGYLNGQLNVARAIGDWHMEGMKGEDGGPLSAEPELMTTKLTAEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPAMCSKDLVDEALKRKSGDNLAAVVVCFQQQPPPNLVAPRSRVHRSFSAEGLKELQSFLDSLGN. 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00899 419 SUPERFAMILY PP2C-like 79 385 IPR036457 -
Seca4g00899 419 SMART PP2C_4 74 381 IPR001932 -
Seca4g00899 419 Gene3D - 65 387 IPR036457 -
Seca4g00899 419 ProSiteProfiles PPM-type phosphatase domain profile. 84 383 IPR001932 -
Seca4g00899 419 MobiDBLite consensus disorder prediction 1 29 - -
Seca4g00899 419 CDD PP2Cc 84 383 IPR001932 -
Seca4g00899 419 MobiDBLite consensus disorder prediction 10 29 - -
Seca4g00899 419 Pfam Protein phosphatase 2C 159 375 IPR001932 -
Seca4g00899 419 PANTHER PROTEIN PHOSPHATASE 2C 71 381 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00899 Seca-Chr4 14910530 14914165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00899 1 419 PP2C-type Phosphatase Gene Family AT2G25620 62.937 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00899 K14803 - gmx:100815725 620.157