Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00861 ATGTTTTTTCAGTTATTGTTCAAACAAGAACCTGGAGACATGGTTGGAGAAATAGGCGTGATGTTGAATATTCCACAACCTTATACAGTGAGAAGTAGAAGGCTATCCCAGGTCATACGAATAAGTCATCAACATTTCAAGGAAAAGGTGCAGCCATTTACTGACGATGGGAAGGCAATCATCAGCAACTTTATTCAGGGCCTAAATGGCGAGGTGCTAGAAGAAATACCGTGTGTAACAGAATTGTTGGGTGACCTGCATGATGAGCATCTAACACAAAATGAGGGCACACACGATAATGTTTCGAGTTATCATGAAGATGATCCATATGAAGAAGGTAACCTTAATCCTATGCTTAGTAAAAACAATATGACATGTTTACAATTACAGTCCTTATTCTATAGCGGATAG 411 0.3893 MFFQLLFKQEPGDMVGEIGVMLNIPQPYTVRSRRLSQVIRISHQHFKEKVQPFTDDGKAIISNFIQGLNGEVLEEIPCVTELLGDLHDEHLTQNEGTHDNVSSYHEDDPYEEGNLNPMLSKNNMTCLQLQSLFYSG. 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00861 136 SUPERFAMILY cAMP-binding domain-like 7 66 IPR018490 -
Seca4g00861 136 CDD CAP_ED 3 61 IPR000595 -
Seca4g00861 136 Gene3D Jelly Rolls 4 75 IPR014710 -
Seca4g00861 136 PANTHER POTASSIUM CHANNEL AKT1 8 103 IPR045319 GO:0005249|GO:0006813
Seca4g00861 136 ProSiteProfiles cAMP/cGMP binding motif profile. 12 67 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00861 Seca-Chr4 14267682 14270860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00861 4 85 Ion Channels AT4G32650 59.302 3.68e-25 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00861 K21867 - gmx:100794620 149.828