Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00808 ATGTACAATCAATTTAATAAGGAGTTAACATATGTCAAGAACTTAGTGAGTGCAAATCAGGAGCAGATTGTAGAGGAAATATTACAAAATATTAAGAAGGATTTAATTCTTCTTGGTACTACTGCAGTTGAAGACAAACTACAAGATGAGGTTCCTGAATGCATTGACAAGCTAGAACAGGCTGGGATTAAGTTATGGGTTTTGTGTAACATCCCAAAAACTAGGATTTTAGGAATTTTAATGAAGTTATAA 252 0.3254 MYNQFNKELTYVKNLVSANQEQIVEEILQNIKKDLILLGTTAVEDKLQDEVPECIDKLEQAGIKLWVLCNIPKTRILGILMKL. 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00808 83 SUPERFAMILY HAD-like 32 68 IPR036412 -
Seca4g00808 83 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 2 68 - -
Seca4g00808 83 Gene3D - 20 70 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00808 Seca-Chr4 13438214 13438640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00808 2 68 Primary Pumps ATPases AT1G68710 61.194 1.31e-23 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00808 K01530 - gmx:100799312 110.538