Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00793 ATGAAGTGGTGTTTAATAAAGAAGGTTCATGTTGATTTGAGGAAATGGATTCATGACAACGTGAGTCCTCAAGTTGCTGCAACTGAAAGGCAAAGGGTATTGTTGCATGATGTTGATTTGTTGAGAAAACATATTGATGAGCTTGCAGCACTTGAAACTTGGGATAATGGGAAGCCATATGAACACTCTGCACATATTGTAATATTAATGTTGGATCACCCATTTTGA 228 0.3728 MKWCLIKKVHVDLRKWIHDNVSPQVAATERQRVLLHDVDLLRKHIDELAALETWDNGKPYEHSAHIVILMLDHPF. 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00793 75 Pfam Aldehyde dehydrogenase family 24 70 IPR015590 GO:0016491
Seca4g00793 75 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 12 72 IPR016162 GO:0016491
Seca4g00793 75 SUPERFAMILY ALDH-like 24 72 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00793 Seca-Chr4 13270030 13272744 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00793 14 75 Aldehyde Dehydrogenase Gene Family AT1G23800 51.613 3.32e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00793 K00128 - jre:118344148 70.0922