Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00775 ATGGTTCGATTGGTACAGAGGGTTTCCTCAGGTGAAACGCAATTCAGGTGCTTGCCCAAGTCAAGTGCTATTAAGCTGATTGATTTTGGTAGTACTGCATTTGATAATCAGAATCATAGCTCCATTGTTTCTACAAGGCATTACAGAGCCCCTGAGGTTATTTTAGGTCTAGGGTGGTCATACCCATGTGATTTGTGGAGTGTTGGATGTATTCTCATGGAACTATGCACGGGTGAAGCTTTGTTTCAGACTCATGAAAACTTGGAGCACCTGGCAATGATGGAGAGAGTCTTGGGACCTCTACCAGAGCACATGGTTCGAAGATCCAACAAGGGCGCAGAAAAGTATTTCAAGCGTGGATCACGGTTAAGATGGCCTGAAGGAGCTGTTTCAAGGGAGAGCATAAATGCAGTGAAGAAGCTTGGTCATCTTAAGGATATTGTATCACGTTATGCAGAGGCCTCAAGGGCTTCGTTAACTGACTTGTTACATGGCTTATTAACATATGATCCGTCTGAACGTCTAACTGCTCGTGAAGCCCTTGATCATCCCTTCTTTAGGGATCCAACTTAA 573 0.4433 MVRLVQRVSSGETQFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDLWSVGCILMELCTGEALFQTHENLEHLAMMERVLGPLPEHMVRRSNKGAEKYFKRGSRLRWPEGAVSRESINAVKKLGHLKDIVSRYAEASRASLTDLLHGLLTYDPSERLTAREALDHPFFRDPT. 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00775 190 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 8 188 - -
Seca4g00775 190 Gene3D Transferase(Phosphotransferase) domain 1 19 186 - -
Seca4g00775 190 ProSiteProfiles Protein kinase domain profile. 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g00775 190 SMART serkin_6 2 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g00775 190 Pfam Protein kinase domain 21 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g00775 190 SUPERFAMILY Protein kinase-like (PK-like) 21 188 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00775 Seca-Chr4 13024218 13025786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00775 25 186 EF-hand Containing Proteins AT5G22840 31.429 2.13e-22 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Seca4g00775 Pkinase 2.3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00775 K08287 - gmx:100782453 345.51