Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00745 ATGAAGTCAACAACACCCCACATGTTCTACAAGACTCTCGCTGCTTCTGATACTAACACTCATGTTGGATTCTCCGTGCCTCGTCGAGCAGCTGAAGATTGCTTTCCTCCCCTAGTAGTAATGAATGATGCATTCCTTTCCTCTTGTCAAAATGACATGTCAATCTTTCTGTCACATTAG 180 0.4333 MKSTTPHMFYKTLAASDTNTHVGFSVPRRAAEDCFPPLVVMNDAFLSSCQNDMSIFLSH. 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00745 59 SUPERFAMILY DNA-binding pseudobarrel domain 3 39 IPR015300 -
Seca4g00745 59 Gene3D - 7 56 IPR015300 -
Seca4g00745 59 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 5 40 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00745 Seca-Chr4 12545089 12545268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00745 5 38 B3 DNA Binding Superfamily AT5G60450 85.294 1.54e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00745 K14486 - lja:Lj2g3v0992530.1 75.485