Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00736 ATGAAAACCCATCAACCAAAGCTGAAAACCCAACTATTCTCATGTGGCTTCTTTCGCCATTGCGCTCAAAGCGTCCTTAGCCCCACAGCTACAAGTAGTGCCACACCACCACTCCCTCTCAGTCATCACACTACTCACACCCCAACCCCTCAATGCGAATCCTCCACCTCTTCCTCTTCTTCCAACACTTCTCAAAGCTTCACACAATGGAGATTCTCTCTCCCCACTCCCACTGCCACCCCCAACACCATCACAAACCCTCACCCTCCCCTTCCTCCTTCACCTTCCCCTTCCCCTTCTCCTTCACCTTTCACCATTCCCAACCTCCAAGAACTCTTCCACGTGTCAGAACTCCAACTCAGCACAGACCCTAACGGTGCCCTTCAGCTTCTAGAACGTTCCTTGGTTCCCAACCCGCCGCAAGAGCAGCCACCGTGTCCTCCTAACCTCATGCGCGCTCTCATCGCGAATCTCAGAGAGGCCAAGCCCGCCACCAAGATACTCTTCGCTCTTTGCTTGTCGGAGGCCAACCGCCGCGTCGCCGTCGAATCCGGCGCCGTCGGAGCCGTCGTGGAGTCGGCGCTGGAGCTTGATGGCTCGCCGGCGGAGAGGGCTCTGGCCGCGCTTGAGCTCATGTGTACGGTGGCGGAGGGGGCGGAGGAGGTGAGGATCCACGCGCTGGCGGTGCCGGTGATGGTCACCATGATGGGGAAGACGGGGGCGCGTGGGAAGGAGTACGCTATCGGAGTGCTGGCGGTGATATACGGTGGTGCTGTGGCGGAGCAGCATACGGCTCCGCCGGAAGAGGTGGCGCGTGCGGTGGAATTGGCACTGCAAGGAGAGTGCAGCGCCAGAGGGAGAAGAAAGGGTGGGCAATTGTTGAAGACACTGCAACTCCTCTCTCACCCTCCCCAGTCCCACAGTACTCTTACTTGA 936 0.5887 MKTHQPKLKTQLFSCGFFRHCAQSVLSPTATSSATPPLPLSHHTTHTPTPQCESSTSSSSSNTSQSFTQWRFSLPTPTATPNTITNPHPPLPPSPSPSPSPSPFTIPNLQELFHVSELQLSTDPNGALQLLERSLVPNPPQEQPPCPPNLMRALIANLREAKPATKILFALCLSEANRRVAVESGAVGAVVESALELDGSPAERALAALELMCTVAEGAEEVRIHALAVPVMVTMMGKTGARGKEYAIGVLAVIYGGAVAEQHTAPPEEVARAVELALQGECSARGRRKGGQLLKTLQLLSHPPQSHSTLT. 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00736 311 Gene3D - 127 303 IPR011989 -
Seca4g00736 311 MobiDBLite consensus disorder prediction 28 107 - -
Seca4g00736 311 MobiDBLite consensus disorder prediction 28 81 - -
Seca4g00736 311 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 301 - -
Seca4g00736 311 MobiDBLite consensus disorder prediction 82 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00736 Seca-Chr4 12415341 12416276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00736 149 298 U-box Gene Family AT1G49780 33.113 2.02e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00736 - - gmx:100814020 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00736 4 12415341 12416276 Seca4g00736 4 12415341 12416276 ECH