Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00718 ATGGAGATGGATGATAATGAAGTTGATTCAACTACACCATCAAAAGCTTTCAATGATTCAGTGAACGCATCAGAGGAATGGATTCCTATGTGTGATGAAGAACTTAAACCCGTAATTGGAATGGTCTTTGTTGCTTTAGAAGAAGGAGAAGACTTTTATAAAAGGTATGCACATGCTGCTGGTTTTAGTGTACGCAAATCATCTGAAACAAAAGATAAAAATGGCATGAAGTGGAAGTATTTTCTTTGTTCAAAACAAGGTTTGTTAAGTGAGATCCAATTAATTTCTGATGCCTGGGCACAATTGTTTAAATGCATGCACATGGCCGGTACATGTAAAGAGAAACTACTCCTTGTCATAAAAGAAGCTTCTAATATTGAATTGAAATTAAGTCAAGCAGAAGGTGATGTTGGACCAAGCAAGTTAGATGAATTAGAGTCTTTTATTGGCTCTAATGTGCCTAAGGATATTGAAATTCTTCCTCCTGAACCTTCAAATACCAAAGGATGTGGAAAATGA 519 0.3584 MEMDDNEVDSTTPSKAFNDSVNASEEWIPMCDEELKPVIGMVFVALEEGEDFYKRYAHAAGFSVRKSSETKDKNGMKWKYFLCSKQGLLSEIQLISDAWAQLFKCMHMAGTCKEKLLLVIKEASNIELKLSQAEGDVGPSKLDELESFIGSNVPKDIEILPPEPSNTKGCGK. 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00718 172 Pfam FAR1 DNA-binding domain 51 91 IPR004330 -
Seca4g00718 172 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 18 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00718 Seca-Chr4 12133485 12134003 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca4g00718 FAR1 5.5e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00718 - - mtr:120577464 129.413