Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00671 ATGAGGATGAAGATTGCTCTTGATACAGCAAGAGGTTTAAAATATCTGCATGAGCATTATTACCCTCCAGTGATCCATAGAGATCTGAAATCTTCTAATATTCTTTTAGATGCAAACTTCAATGCCAAGGTAAAAAAGGACCATGTTAAAATTGTTGAATAA 162 0.3333 MRMKIALDTARGLKYLHEHYYPPVIHRDLKSSNILLDANFNAKVKKDHVKIVE. 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00671 53 Gene3D Transferase(Phosphotransferase) domain 1 1 45 - -
Seca4g00671 53 ProSiteProfiles Protein kinase domain profile. 1 53 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g00671 53 SUPERFAMILY Protein kinase-like (PK-like) 2 44 IPR011009 -
Seca4g00671 53 ProSitePatterns Serine/Threonine protein kinases active-site signature. 24 36 IPR008271 GO:0004672|GO:0006468
Seca4g00671 53 Pfam Protein kinase domain 4 43 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca4g00671 53 PANTHER OS07G0668900 PROTEIN 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00671 Seca-Chr4 11192216 11192452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00671 1 44 Receptor kinase-like Gene Family AT1G80640 75.000 3.21e-20 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Seca4g00671 Pkinase 2.8e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00671 - - ahf:112784689 84.3445