Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00630 ATGGCGAAGAATCCCGACTCTCACCGTCAACATCCCCGCCAACAACACCGGTTCAAACCTCGACCTCCCTCATCAGCGCCTCGCTCCTCGAAGTCTCATTCTAGGGTTCCACTGACGCTGTTGTTGCGGGTAGCGTCAGTGGCCGGTGGCATTCAGTTTGGATGGGCCTTGCAGCTCTCTCTTCTCACGCCGTACGTGCAGCAGCTCGGAATCCCGCACGCCTGGGCCAGCATCATATGGCTCTGTGGCCCCCTCTCTGGGCTCCTCGTTCAGCCCTTGGTCGGCCACCTGAGTGACCGGTGCACCAGCCGGTTCGGGCGCCGGAGACCGTTTATCCTTGCCGGAGCAGTGTCCATCATCATCTCTGTTCTCGTCATTGGTCACGCCGCGGACCTTGGTTGGTATTTCGGTGACAACGTGGACCATAGGCCCGCCGCTGTGGGCTTTTTTGTGTTCGGGTTTTGGATTTTGGATGTGGCTAACAATGTCACTCAAGGCCCTTGTAGAGCCCTGCTTGGTGATCTCACTGGTAAATTTCTCCTCCCTATGATCTAA 555 0.5748 MAKNPDSHRQHPRQQHRFKPRPPSSAPRSSKSHSRVPLTLLLRVASVAGGIQFGWALQLSLLTPYVQQLGIPHAWASIIWLCGPLSGLLVQPLVGHLSDRCTSRFGRRRPFILAGAVSIIISVLVIGHAADLGWYFGDNVDHRPAAVGFFVFGFWILDVANNVTQGPCRALLGDLTGKFLLPMI. 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00630 184 Pfam MFS/sugar transport protein 56 173 - -
Seca4g00630 184 SUPERFAMILY MFS general substrate transporter 41 176 IPR036259 -
Seca4g00630 184 PANTHER SUGAR TRANSPORTER 31 177 - -
Seca4g00630 184 Gene3D MFS general substrate transporter like domains 40 178 IPR036259 -
Seca4g00630 184 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00630 Seca-Chr4 10391106 10391660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g00630 6 176 Sucrose Transporter Gene Family AT1G09960 69.714 8.46e-78 239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00630 4 10391106 10391660 Seca4g00630 4 10391106 10391660 ECH