Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00566 ATGGCTAAACGCTTCAAGATGAAATTCACCGTCCCTTTATTTCAAATGTGTCGCTCAAAAGACCTTTCCTCTTTCCCAGGAAATCCAGTTCCCGCCATATACCGTCTTTCTCCTGTGAACCCCAAAGCACGTGACATAGGGTACCCTACCCTACCAGGTCCGCCACCGTCCTCACCGGAAGGCAAGGTGTCCTCAAAGATCATGTCCATCGCCCAAGGATGCCAAATGTGCCGTGATAAAGAGATTAATAAAGTAAAATCCAAAGGGCGAAAAAGTACATCAAGGAGGAGTAACTTTCTAATTGACAGCACCAACGAAGAAGAAAGTGAAACTCTGATTTCTTGCTTGACAAGCTTCTCCGACGAGATGGTCCTTTCTCCCGGTAACAAAACGGAGAGAGATTTGATGAGTAGCAGGCATAGAAGGAAGGTGAGCAGCGTGAAGAAGGTTCAGAAAGTGAGGTTTCACAGTGTGGAGAACAGAGGAGGAGGAACAGAAACGAAGCAGCAGGTGAAGAAGAAGGTTATGTCAAGGTCATTATCATCAATGAGTATGGAGGGGAAGGTGAAGGAGAGCTTTGCGGTGGTTAAAAAATCAAAGGATCCGTATGAAGACTTCAAGAAATCGATGGTGGAGATGATAGCGGAGATGGAGATGTCTGAGGCTGAGGACTTGGAGCAACTGTTGCAGTGTTTCCTGGCTTTGAACTCTAGGAGTTATCATGCAGTAATTGTGCGAGCTTTTATGGAGATCTGGCAACAGATGTTCACTTGGAACCCTACGTCGATTAAAAATCTCCAATCAGATGTGGAAAACTAG 819 0.4554 MAKRFKMKFTVPLFQMCRSKDLSSFPGNPVPAIYRLSPVNPKARDIGYPTLPGPPPSSPEGKVSSKIMSIAQGCQMCRDKEINKVKSKGRKSTSRRSNFLIDSTNEEESETLISCLTSFSDEMVLSPGNKTERDLMSSRHRRKVSSVKKVQKVRFHSVENRGGGTETKQQVKKKVMSRSLSSMSMEGKVKESFAVVKKSKDPYEDFKKSMVEMIAEMEMSEAEDLEQLLQCFLALNSRSYHAVIVRAFMEIWQQMFTWNPTSIKNLQSDVEN. 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00566 272 ProSiteProfiles OVATE domain profile. 195 254 IPR006458 -
Seca4g00566 272 MobiDBLite consensus disorder prediction 83 103 - -
Seca4g00566 272 Pfam Transcriptional repressor, ovate 199 256 IPR006458 -
Seca4g00566 272 NCBIfam uncharacterized plant-specific domain TIGR01568 193 255 IPR006458 -
Seca4g00566 272 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 91 256 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00566 Seca-Chr4 9169829 9170647 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca4g00566 Ovate 3.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g00566 - - gmx:102662518 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00566 4 9169829 9170647 Seca4g00566 4 9169829 9170647 ECH